RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OR4C6Q8NH72 309 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CXorf40BQ96DE9 158 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SENP8Q96LD8 212 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C8orf48Q96LL4 319 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF347Q96SE7 839 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ITM2CQ9NQX7 267 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 GDAP2Q9NXN4 497 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 H3BNH8 94 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ENTPD6O75354 484 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 IL7P13232 177 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 PTGIRP43119 386 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF404Q494X3 552 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SNAP47Q5SQN1 464 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 RHBDF2Q6PJF5 856 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 LDB1Q86U70 411 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 CAND1Q86VP6 1230 aaKnown RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SNX29P2Q8IUI4 249 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 UNC5BQ8IZJ1 945 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM86AQ8N2M4 240 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C2orf73Q8N5S3 287 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MFSD14AQ96MC6 490 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MCCC1Q96RQ3 725 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-201ENST00000334504 OR2B2Q9GZK3 357 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 IL1RAPQ9NPH3 570 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 C1orf109Q9NX04 203 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 HIF3AQ9Y2N7 669 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 MED31Q9Y3C7 131 aa9.67□□□□□ -0.86
COL4A6-201ENST00000334504 SCAMP3O14828 347 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF208O43345 1280 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 OR4F21O95013 312 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 SLC25A14O95258 325 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 AMD1P17707 334 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 RAB5BP61020 215 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 RHDQ02161 417 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF460Q14592 562 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF311Q5JNZ3 666 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 DUS1LQ6P1R4 473 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TMBIM1Q969X1 311 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 IFT27Q9BW83 186 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GATA5Q9BWX5 397 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 NUDT4Q9NZJ9 180 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 KCNIP3Q9Y2W7 256 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 DISC1C4P0D8 188 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 LCP2Q13094 533 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TMC8Q8IU68 726 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZBTB2Q8N680 514 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 OR2L8Q8NGY9 312 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ISOC1Q96CN7 298 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PPP1R16AQ96I34 528 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TSNAXQ99598 290 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TTYH2Q9BSA4 534 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 C2orf49Q9BVC5 232 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 CERS4Q9HA82 394 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 AGO1Q9UL18 857 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TCAF2A6NFQ2 919 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 NPHS1O60500 1241 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 CYP3A4P08684 503 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 XRCC1P18887 633 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 HTR2BP41595 481 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 VLDLRP98155 873 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PIGZQ86VD9 579 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GLOD4Q9HC38 313 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 NOP16Q9Y3C1 178 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 LOC100130705A0A1B0GUX0 176 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 SLC22A2O15244 555 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 INMTO95050 263 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PENKP01210 267 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 IL7RP16871 459 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PRKACBP22694 351 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TNFSF9P41273 254 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 HSPA7P48741 367 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ZNF410Q86VK4 478 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 POGLUT1Q8NBL1 392 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 REPS2Q8NFH8 660 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 CANT1Q8WVQ1 401 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 NXPE2Q96DL1 559 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 CNDP2Q96KP4 475 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 HSFY1Q96LI6 401 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GPR21Q99679 349 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 C1QTNF7Q9BXJ2 289 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 DEFB129Q9H1M3 183 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ALKBH4Q9NXW9 302 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ERVK-11Q9UQG0 969 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ASF1AQ9Y294 204 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 YARS2Q9Y2Z4 477 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 A0A1W2PRQ8 180 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 H3BRB1 525 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 TLR4O00206 839 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 SLC33A1O00400 549 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 AMHP03971 560 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 F8A1P23610 371 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 GADD45AP24522 165 aa9.66□□□□□ -0.86
COL4A6-201ENST00000334504 ATP5C1P36542 298 aaKnown RBP9.66□□□□□ -0.86
COL4A6-201ENST00000334504 XKP51811 444 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms