RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 UAP1L1Q3KQV9 507 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 RBM20Q5T481 1227 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF572Q7Z3I7 529 aaPredicted RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 YTHDF3Q7Z739 585 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 PIM3Q86V86 326 aa14.76□□□□□ -0.05
C9orf47-201ENST00000334490 WDR6Q9NNW5 1121 aaKnown RBP14.76□□□□□ -0.05
C9orf47-201ENST00000334490 ECI2O75521 394 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 LAMP2P13473 410 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 AVPR1BP47901 424 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 CCR8P51685 355 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 CYP4F3Q08477 520 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TCEAL8Q8IYN2 117 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 ANKRD49Q8WVL7 239 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SORCS1Q8WY21 1168 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SCAMP4Q969E2 229 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TLCD1Q96CP7 247 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TUBGCP5Q96RT8 1024 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 USP29Q9HBJ7 922 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 LZTS1Q9Y250 596 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 COQ6Q9Y2Z9 468 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SH3GLB1Q9Y371 365 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 GMPPBQ9Y5P6 360 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 MYH3P11055 1940 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 FAM159BA6NKW6 160 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 PRR23D1E9PI22 279 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 KMOO15229 486 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 GRID2O43424 1007 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 PGLSO95336 258 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 PRR23D2P0DMB1 279 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 CLDN10P78369 228 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 PTSQ03393 145 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 ANGPT1Q15389 498 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 MSS51Q4VC12 460 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 WDR45BQ5MNZ6 344 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 POMZP3Q6PJE2 187 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TRIM74Q86UV6 250 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 PROSER1Q86XN7 944 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 LENG8Q96PV6 779 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 DEPDC7Q96QD5 511 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 ZNF184Q99676 751 aaPredicted RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 KLHL1Q9NR64 748 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TEX264Q9Y6I9 313 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 NWD2Q9ULI1 1742 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 A0A0J9YVX5 310 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 A0A1W2PP55 124 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SAP18O00422 153 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 KRT36O76013 467 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 GRIA2P42262 883 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 HNMTP50135 292 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 RPS14P62263 151 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SRSF11Q05519 484 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 RALGDSQ12967 914 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 NFATC2Q13469 925 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 EIF4HQ15056 248 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 DGKKQ5KSL6 1271 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 GLYATQ6IB77 296 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 ISLR2Q6UXK2 745 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SMPDL3AQ92484 453 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 POP5Q969H6 163 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 CDK15Q96Q40 435 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SLC38A2Q96QD8 506 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TRPS1Q9UHF7 1281 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 LINC00854A0A1B0GVQ3 168 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 OR6B1O95007 311 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 STC1P52823 247 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 FGD2Q7Z6J4 655 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 LMX1AQ8TE12 382 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 CYP8B1Q9UNU6 501 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SAMD4AQ9UPU9 718 aaKnown RBP14.75□□□□□ -0.05
C9orf47-201ENST00000334490 SLC22A14Q9Y267 594 aa14.75□□□□□ -0.05
C9orf47-201ENST00000334490 TNFAIP8O95379 198 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 CHRNGP07510 517 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 IGFALSP35858 605 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 HERVK_113P63132 956 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 PRR5P85299 388 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 PRKD1Q15139 912 aaPredicted RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 KBTBD6Q86V97 674 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 KIAA2013Q8IYS2 634 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 GSTCDQ8NEC7 633 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TOP1MTQ969P6 601 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ERVK-6Q9BXR3 956 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ANKHQ9HCJ1 492 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 H3BQ06 376 aaPredicted RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TSPAN19P0C672 248 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 IMPDH1P20839 514 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 LARS2Q15031 903 aaKnown RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 INAVAQ3KP66 663 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ERICH5Q6P6B1 374 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 FBXO15Q8NCQ5 510 aaPredicted RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 EEF1AKMT1Q8WVE0 214 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 CENPIQ92674 756 aaPredicted RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TEFMQ96QE5 360 aaKnown RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 CDC7O00311 574 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ARHGEF9O43307 516 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 TGFB1P01137 390 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 FOSL2P15408 326 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 RYKP34925 604 aa14.74□□□□□ -0.05
C9orf47-201ENST00000334490 ELAVL3Q14576 367 aaKnown RBP14.74□□□□□ -0.05
C9orf47-201ENST00000334490 GCNT6Q5T4J0 391 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms