RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 KCNJ12Q14500 433 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 MPEG1Q2M385 716 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SPRED3Q2MJR0 410 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 GOLGA7BQ2TAP0 167 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 BMP2KLQ5H9B9 411 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CDKL4Q5MAI5 379 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 MLIPQ5VWP3 458 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 METTL2BQ6P1Q9 378 aaKnown RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 APOA5Q6Q788 366 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 LINGO4Q6UY18 593 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 KDM7AQ6ZMT4 941 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 QSOX2Q6ZRP7 698 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PPP1R3BQ86XI6 285 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PALB2Q86YC2 1186 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 BBS7Q8IWZ6 715 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM22Q8IYM9 498 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 BLIDQ8IZY5 108 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF567Q8N184 647 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 RNF149Q8NC42 400 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 NT5CQ8TCD5 201 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TAS1R2Q8TE23 839 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ADAMTS16Q8TE57 1224 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PARD3BQ8TEW8 1205 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 HMGB4Q8WW32 186 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PSMF1Q92530 271 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SNX19Q92543 992 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TBC1D5Q92609 795 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 RND1Q92730 232 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TP53INP1Q96A56 240 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ZUFSPQ96AP4 578 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 HSPBAP1Q96EW2 488 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 STAMBPL1Q96FJ0 436 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DIRC2Q96SL1 478 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF442Q9H7R0 627 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 UCKL1Q9NWZ5 548 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 COQ3Q9NZJ6 369 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CLCF1Q9UBD9 225 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 B4GALT6Q9UBX8 382 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 KLQ9UEF7 1012 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SIX4Q9UIU6 781 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 KIF3AQ9Y496 699 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 REV3LO60673 3130 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 HERC1Q15751 4861 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 WNK1Q9H4A3 2382 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 FEZF1A0PJY2 475 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC151A5D8V7 595 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 MSGN1A6NI15 193 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 XPNPEP2O43895 674 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DNAJA2O60884 412 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SS18L1O75177 396 aaPredicted RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SIN3BO75182 1162 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 B3GAT3O94766 335 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SCELO95171 688 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CCNDBP1O95273 360 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ASS1P00966 412 aaKnown RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 EPOP01588 193 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 GLI4P10075 376 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CPB1P15086 417 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 RHOQP17081 205 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 AGXTP21549 392 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 HLA-FP30511 346 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 VIPR1P32241 457 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 LONP1P36776 959 aaKnown RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 WASP42768 502 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 NPTX2P47972 431 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 UQCRFS1P47985 274 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 BPIFB4P59827 614 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DUSP4Q13115 394 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PRTGQ2VWP7 1150 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 C4orf48Q5BLP8 95 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM198Q66K66 360 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PNCKQ6P2M8 343 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 UNC5DQ6UXZ4 953 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 Q6ZSR6 202 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 VASH1Q7L8A9 365 aaPredicted RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF677Q86XU0 584 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DOLPP1Q86YN1 238 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 WFDC3Q8IUB2 231 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SYTL1Q8IYJ3 562 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 FAM109AQ8N4B1 249 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TRAM1L1Q8N609 369 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 OR2A12Q8NGT7 310 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 NUBPLQ8TB37 319 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DEPTORQ8TB45 409 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ADAMTS15Q8TE58 950 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 RIT1Q92963 219 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ARRDC3Q96B67 414 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ULK4Q96C45 1275 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 OR2M4Q96R27 311 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SMC6Q96SB8 1091 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 IL12RB2Q99665 862 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 EBNA1BP2Q99848 306 aaKnown RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 APOL2Q9BQE5 337 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 POTEKPQ9BYX7 375 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM7Q9C029 511 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 MTMR12Q9C0I1 747 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 DPEP2Q9H4A9 486 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PHPT1Q9NRX4 125 aaPredicted RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 FBXL12Q9NXK8 326 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms