RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TRAF3Q13114 568 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ACOX1Q15067 660 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SYT16Q17RD7 645 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 TXNDC11Q6PKC3 985 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SCAMP5Q8TAC9 235 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ELMO1Q92556 727 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SMARCD1Q96GM5 515 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 BRINP2Q9C0B6 783 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 RASSF1Q9NS23 344 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 POLR3HQ9Y535 204 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 TANC1Q9C0D5 1861 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 EFCAB9A8MZ26 197 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 GABRDO14764 452 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 FAM20BO75063 409 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 PAPSS2O95340 614 aaPredicted RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 NPPAP01160 153 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 DBTP11182 482 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 IGFBP5P24593 272 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 GRK3P35626 688 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 CYP20A1Q6UW02 462 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF486Q96H40 463 aaPredicted RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 CYP2S1Q96SQ9 504 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 ZBTB18Q99592 522 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 ARNT2Q9HBZ2 717 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 CATSPERZQ9NTU4 200 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 GPSM3Q9Y4H4 160 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 ILVBLA1L0T0 632 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 GUCY1B2O75343 617 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 MFN2O95140 757 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 MT-ND2P03891 347 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 GTF2E2P29084 291 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 FLT3LGP49771 235 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 PWP1Q13610 501 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 SEMA3AQ14563 771 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 MFSD10Q14728 455 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 TMEM179BQ7Z7N9 219 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 AADATQ8N5Z0 425 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 SETD9Q8NE22 299 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 OR5K1Q8NHB7 308 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 PHF10Q8WUB8 498 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 PROX1Q92786 737 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 LPPQ93052 612 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 RHNO1Q9BSD3 238 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 KAT8Q9H7Z6 458 aaKnown RBP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 NEK6Q9HC98 313 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.5□□□□□ -0.25
SYNE3-201ENST00000334258 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
SYNE3-201ENST00000334258 ELOVL7A1L3X0 281 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CXCR6O00574 342 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 NDUFS3O75489 264 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 UPK1BO75841 260 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CCNKO75909 580 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 WISP3O95389 354 aaPredicted RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF865P0CJ78 1059 aaPredicted RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 SLC2A4P14672 509 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PFKLP17858 780 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PRKACBP22694 351 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CYP2C18P33260 490 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 GALNT3Q14435 633 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 SMN1Q16637 294 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 AP5B1Q2VPB7 878 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LYSMD2Q8IV50 215 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 SVOPQ8N4V2 548 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ARRDC4Q8NCT1 418 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 OR52B6Q8NGF0 335 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 DCSTAMPQ9H295 470 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ARIH1Q9Y4X5 557 aaPredicted RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PGLSO95336 258 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CHRNB1P11230 501 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 MSH3P20585 1137 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.49□□□□□ -0.253e-9■■■■■ 44.4
SYNE3-201ENST00000334258 STEAP3Q658P3 488 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 TMC5Q6UXY8 1006 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LINC00299Q6ZSB3 139 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 OR4L1Q8NH43 312 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 GPR21Q99679 349 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 AARSD1Q9BTE6 412 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 HOXD1Q9GZZ0 328 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 MOV10Q9HCE1 1003 aaKnown RBP13.49□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF225Q9UK10 706 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 IKZF3Q9UKT9 509 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CDH9Q9ULB4 789 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 PCDHB14Q9Y5E9 798 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 GMPPBQ9Y5P6 360 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 E9PAM4 449 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 RGS10O43665 173 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 LDB2O43679 373 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 IDH3BO43837 385 aa13.49□□□□□ -0.25
SYNE3-201ENST00000334258 CAPN1P07384 714 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms