RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 GADD45GO95257 159 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 IFNA17P01571 189 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CYP1A2P05177 515 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 MTHFD1P11586 935 aaKnown RBP12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 AHCYP23526 432 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 GRIA1P42261 906 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 SLC15A1P46059 708 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 THOP1P52888 689 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 CCDC71Q8IV32 467 aaPredicted RBP12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 OR14K1Q8NGZ2 314 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 ADAMTS15Q8TE58 950 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 KCTD7Q96MP8 289 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 TBCBQ99426 244 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 C3orf14Q9HBI5 128 aa12.58□□□□□ -0.39
RAB11FIP1-202ENST00000330843 NINQ8N4C6 2090 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 A8MVJ9 347 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CLDN5O00501 218 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CD247P20963 164 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TSTQ16762 297 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GPR158Q5T848 1215 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 XKR5Q6UX68 686 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LNX1Q8TBB1 728 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TUT1Q9H6E5 874 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CHRAC1Q9NRG0 131 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 QPCTLQ9NXS2 382 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C14orf166Q9Y224 244 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MED14O60244 1454 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DAPL1A0PJW8 107 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NUAK1O60285 661 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR5T1Q8NG75 326 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FUZQ9BT04 418 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ABCD2Q9UBJ2 740 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CMAHPQ9Y471 501 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DGKEP52429 567 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LARS2Q15031 903 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ADAMTSL2Q86TH1 951 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PSD2Q9BQI7 771 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MRPS23Q9Y3D9 190 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC22A1O15245 554 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NOS2P35228 1153 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MAP3K8P41279 467 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SF1Q15637 639 aaKnown RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ANKDD1AQ495B1 522 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RNF180Q86T96 592 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TMEM27Q9HBJ8 222 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MARCH2Q9P0N8 246 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MYH1P12882 1939 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MYH4Q9Y623 1939 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MYH7BA7E2Y1 1941 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ANKRD63C9JTQ0 380 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 EI24O14681 340 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HTR2AP28223 471 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GPD2P43304 727 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C12orf29Q8N999 325 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C1QTNF7Q9BXJ2 289 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.4
RAB11FIP1-202ENST00000330843 URADA6NGE7 173 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRMT5O14744 637 aaPredicted RBP12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RPP14O95059 124 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CDRT1O95170 752 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LAMP2P13473 410 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SSR2P43308 183 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 USP41Q3LFD5 358 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DCST2Q5T1A1 773 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RHBDF2Q6PJF5 856 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CHST13Q8NET6 341 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZMIZ2Q8NF64 920 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCDHB16Q9NRJ7 776 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PDCD5O14737 125 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CHMP24386 653 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ERVK-25P63136 954 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NFE2L1Q14494 772 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TMEM236Q5W0B7 351 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ACOT12Q8WYK0 555 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 VNN3Q9NY84 501 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCDHGC3Q9UN70 934 aa12.57□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR12D2P58182 307 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms