RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CBSLP0DN79 551 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 IDSP22304 550 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 CBSP35520 551 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 TNFSF10P50591 281 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 KPNA2P52292 529 aaKnown RBP14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 SARM1Q6SZW1 724 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 LRRTM4Q86VH4 590 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 RAVER1Q8IY67 606 aaKnown RBP14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 NDUFAF2Q8N183 169 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 NACC2Q96BF6 587 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 MAGED4Q96JG8 741 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 IFT80Q9P2H3 777 aaPredicted RBP14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 WDR37Q9Y2I8 494 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 HCFC1P51610 2035 aa14.3□□□□□ -0.12
CTHRC1-201ENST00000330295 DFFAO00273 331 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 KMOO15229 486 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 DAPK3O43293 454 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 AKR1B10O60218 316 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 ZWINTO95229 277 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 PDHA1P08559 390 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 IL4RP24394 825 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 HSPA9P38646 679 aaKnown RBP14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 HALP42357 657 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 PREPP48147 710 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 ZNF135P52742 658 aaPredicted RBP14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 TPI1P60174 286 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 PIGHQ14442 188 aaPredicted RBP14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 PSTKQ8IV42 348 aaKnown RBP14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 ARHGAP12Q8IWW6 846 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 DNAAF3Q8N9W5 541 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 SDCCAG3Q96C92 435 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 THOC3Q96J01 351 aaKnown RBP14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 TRIM39Q9HCM9 518 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 KCNN3Q9UGI6 736 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 LCMT1Q9UIC8 334 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 FZD10Q9ULW2 581 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 CDYLQ9Y232 598 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 ZNF835Q9Y2P0 537 aa14.29□□□□□ -0.12
CTHRC1-201ENST00000330295 A0A087X0T9 212 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 A0A0J9YYE9 177 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 AKR1B15C9JRZ8 316 aaPredicted RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 MYO1FO00160 1098 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 WISP2O76076 250 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 RASAL1O95294 804 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 TRBC1P01850 177 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 FAM228BP0C875 321 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 UGT1A4P22310 534 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 MMP11P24347 488 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 DNASE1P24855 282 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 PCSK6P29122 969 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 YBX1P67809 324 aaKnown RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 DCDP81605 110 aaKnown RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 SLC9A5Q14940 896 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 ERMARDQ5T6L9 678 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 C1orf189Q5VU69 101 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 MRPL14Q6P1L8 145 aaKnown RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 Q6ZPB1 254 aaPredicted RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 ADGRG6Q86SQ4 1221 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 WFDC11Q8NEX6 87 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 PHF10Q8WUB8 498 aaKnown RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 CTNNBL1Q8WYA6 563 aaPredicted RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 LIME1Q9H400 295 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 FAM83DQ9H4H8 585 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 NPDC1Q9NQX5 325 aaPredicted RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 DNAJB12Q9NXW2 375 aaKnown RBP14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 MXRA5Q9NR99 2828 aa14.28□□□□□ -0.12
CTHRC1-201ENST00000330295 SOCS6O14544 535 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 FZD6O60353 706 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PRAMEF2O60811 474 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PMPCBO75439 489 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 SLC25A14O95258 325 aaPredicted RBP14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 CLDN7O95471 211 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 CDH3P22223 829 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PCK1P35558 622 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 SPINT3P49223 89 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 SLC18A3Q16572 532 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 BOLA3Q53S33 107 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 SPPL2CQ8IUH8 684 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 ZNF547Q8IVP9 402 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 DMRTC2Q8IXT2 367 aaPredicted RBP14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 ZNF599Q96NL3 588 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 NUP85Q9BW27 656 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 THAP2Q9H0W7 228 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 ABHD10Q9NUJ1 306 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PLA2G3Q9NZ20 509 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PCSK1NQ9UHG2 260 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 DNPEPQ9ULA0 475 aa14.27□□□□□ -0.13
CTHRC1-201ENST00000330295 PLEKHA6Q9Y2H5 1048 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms