RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C2orf27AQ580R0 203 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 PLEKHS1Q5SXH7 462 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 ZNF765Q7L2R6 523 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 KBTBD6Q86V97 674 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 AADATQ8N5Z0 425 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TWIST2Q8WVJ9 160 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 C19orf60Q96EN9 201 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TRAPPC9Q96Q05 1148 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 EGFL8Q99944 293 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TUBB1Q9H4B7 451 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TIMM22Q9Y584 194 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 PTGDR2Q9Y5Y4 395 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TMEM202A6NGA9 273 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 H3BQ06 376 aaPredicted RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 KPNA5O15131 536 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 ESRRBO95718 433 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 FTH1P02794 183 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 UBTFL6P0CB48 400 aaPredicted RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 PIK3R1P27986 724 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 HSPA7P48741 367 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 CST6Q15828 149 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 FOXB2Q5VYV0 432 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 CHSY3Q70JA7 882 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 LARP4Q71RC2 724 aaKnown RBP eCLIP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 OR52B6Q8NGF0 335 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 CXorf40AQ8TE69 158 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 RHBDF1Q96CC6 855 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 VCX3BQ9H321 246 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 COPG1Q9Y678 874 aaKnown RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 CKAP5Q14008 2032 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 AHCYL1O43865 530 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 GPC4O75487 556 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 THRAP10827 490 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 GPR1P46091 355 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 DPTQ07507 201 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 TCHHL1Q5QJ38 904 aaPredicted RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 SULT1C3Q6IMI6 304 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 MBOAT1Q6ZNC8 495 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 TRIM74Q86UV6 250 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 PHYKPLQ8IUZ5 450 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 SKA2Q8WVK7 121 aaPredicted RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 TSC22D3Q99576 134 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 NOL11Q9H8H0 719 aaKnown RBP19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 PDE10AQ9Y233 779 aa19.86■□□□□ 0.77
RIPPLY3-201ENST00000329553 ENO4A6NNW6 628 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 H3BNX3 289 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 PIP5K1BO14986 540 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 SLC22A2O15244 555 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 TSPAN6O43657 245 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 MPC1LP0DKB6 136 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 CTHP32929 405 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 GDF5P43026 501 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 RPIAP49247 311 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 RAET1GQ6H3X3 334 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 TMEM220Q6QAJ8 160 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 UBE2R2Q712K3 238 aaPredicted RBP19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 GOLGA7Q7Z5G4 137 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 NLRP8Q86W28 1048 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 EFCAB3Q8N7B9 438 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 DCBLD1Q8N8Z6 715 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 ASB11Q8WXH4 323 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 TMEM79Q9BSE2 394 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 KLHL4Q9C0H6 718 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 CD207Q9UJ71 328 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 F5P12259 2224 aa19.85■□□□□ 0.77
RIPPLY3-201ENST00000329553 QSOX1O00391 747 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 CASQ2O14958 399 aaPredicted RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 NPC1O15118 1278 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 SYNCRIPO60506 623 aaKnown RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 CRCPO75575 148 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 TAS2R38P59533 333 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 GTF2H2Q13888 395 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 SFT2D3Q587I9 215 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 GTF2H2CQ6P1K8 395 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 GPRIN3Q6ZVF9 776 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 ASZ1Q8WWH4 475 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 CDK15Q96Q40 435 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 ZNF382Q96SR6 550 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 SLC12A9Q9BXP2 914 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 AKTIPQ9H8T0 292 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 FAM8A1Q9UBU6 413 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 PRPF19Q9UMS4 504 aaKnown RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 BTRCQ9Y297 605 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 OR7A17O14581 309 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 RNASEH1O60930 286 aaKnown RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 SLCO2B1O94956 709 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 OR4F21O95013 312 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 POU3F3P20264 500 aaPredicted RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 ADSLP30566 484 aaPredicted RBP19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 PRLHRP49683 370 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 ERVPABLB-1P60509 514 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 AGBL4Q5VU57 503 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 LPCAT4Q643R3 524 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 KIAA1211LQ6NV74 962 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 DDIASQ8IXT1 998 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 CD244Q9BZW8 370 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 WWOXQ9NZC7 414 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 SERGEFQ9UGK8 458 aa19.84■□□□□ 0.77
RIPPLY3-201ENST00000329553 UBDO15205 165 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms