RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SH3GL1Q99961 368 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PCDH12Q9NPG4 1184 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 FBXO10Q9UK96 956 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 ST3GAL5Q9UNP4 418 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 MOXD2PA6NHM9 499 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 M0QZQ0 153 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 NIPSNAP2O75323 286 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 EIF2S1P05198 315 aaKnown RBP16.44■□□□□ 0.22
SSH1-201ENST00000326470 JUNDP17535 347 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 CD9P21926 228 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 AKT1P31749 480 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SLC35A2P78381 396 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 TMEM236Q5W0B7 351 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 CD300LGQ6UXG3 332 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SLC22A16Q86VW1 577 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 MSRB3Q8IXL7 192 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 THEM5Q8N1Q8 247 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SETD9Q8NE22 299 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 ZBTB18Q99592 522 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 TBCDQ9BTW9 1192 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 TPRKBQ9Y3C4 175 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SPO11Q9Y5K1 396 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 PTPRDP23468 1912 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 TTC34A8MYJ7 566 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 PRAMEF11O60813 436 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 FTH1P02794 183 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 PFKLP17858 780 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 ACVRL1P37023 503 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 MAP2K4P45985 399 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 NRIP1P48552 1158 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 CACNB2Q08289 660 aaPredicted RBP16.44■□□□□ 0.22
SSH1-201ENST00000326470 SELENBP1Q13228 472 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 B3GNT8Q7Z7M8 397 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 MON1AQ86VX9 555 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 MICU2Q8IYU8 434 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 CD200R1Q8TD46 325 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 ASPSCR1Q9BZE9 553 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SPC25Q9HBM1 224 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 SLC25A37Q9NYZ2 338 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 VPS9D1Q9Y2B5 631 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 GBF1Q92538 1859 aa16.44■□□□□ 0.22
SSH1-201ENST00000326470 CDKN1CP49918 316 aaPredicted RBP16.43■□□□□ 0.22
SSH1-201ENST00000326470 CXCR4P61073 352 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CLCA4Q14CN2 919 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 ABRAXAS2Q15018 415 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PRSS48Q7RTY5 328 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 OR4F6Q8NGB9 312 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PPP3R2Q96LZ3 170 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 NUDT4Q9NZJ9 180 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 AP3M1Q9Y2T2 418 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 U3KQV3 271 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 TTC3P53804 2025 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 DRGXA6NNA5 263 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 OR7A17O14581 309 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CREG1O75629 220 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 HOXB6P17509 224 aaKnown RBP16.43■□□□□ 0.22
SSH1-201ENST00000326470 IL1RNP18510 177 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 FMO3P31513 532 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 GSSP48637 474 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 ST13P50502 369 aaKnown RBP16.43■□□□□ 0.22
SSH1-201ENST00000326470 PPP5CP53041 499 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 NCS1P62166 190 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PTGR1Q14914 329 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PCBP2Q15366 365 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■■■■■ 27.4
SSH1-201ENST00000326470 FAM174BQ3ZCQ3 159 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 RUNDC3AQ59EK9 446 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CTSL3PQ5NE16 218 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PRAMEF19Q5SWL8 479 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 RAP1GAP2Q684P5 730 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 ALG1LQ6GMV1 187 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 LRRC8DQ7L1W4 858 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CIR1Q86X95 450 aaPredicted RBP16.43■□□□□ 0.22
SSH1-201ENST00000326470 GALNT13Q8IUC8 556 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 SCN4BQ8IWT1 228 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CHPFQ8IZ52 775 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 LGI2Q8N0V4 545 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 RHOXF1Q8NHV9 184 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 TRIB2Q92519 343 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 SLIRPQ9GZT3 109 aaKnown RBP16.43■□□□□ 0.22
SSH1-201ENST00000326470 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 INVSQ9Y283 1065 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 CCL27Q9Y4X3 112 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 PCDHB14Q9Y5E9 798 aa16.43■□□□□ 0.22
SSH1-201ENST00000326470 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 CNPP09543 421 aaKnown RBP16.42■□□□□ 0.22
SSH1-201ENST00000326470 SLC2A4P14672 509 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 ZNF24P17028 368 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 PSMA3P25788 255 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 HNRNPFP52597 415 aaKnown RBP16.42■□□□□ 0.22
SSH1-201ENST00000326470 HUNKP57058 714 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 YBEYP58557 167 aaPredicted RBP16.42■□□□□ 0.22
SSH1-201ENST00000326470 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 CDC20Q12834 499 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 TAF1AQ15573 450 aaPredicted RBP16.42■□□□□ 0.22
SSH1-201ENST00000326470 DET1Q7L5Y6 550 aa16.42■□□□□ 0.22
SSH1-201ENST00000326470 CYP2U1Q7Z449 544 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms