RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 HMGCS1Q01581 520 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 TRAP1Q12931 704 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 PRKG2Q13237 762 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 AAK1Q2M2I8 961 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RABL3Q5HYI8 236 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RARS2Q5T160 578 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 OGFRL1Q5TC84 451 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 FAM109BQ6ICB4 259 aaPredicted RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 IFNEQ86WN2 208 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 MINDY1Q8N5J2 469 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 ICA1LQ8NDH6 482 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PPP2R3CQ969Q6 453 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PYCR2Q96C36 320 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 MTFMTQ96DP5 389 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 RIOK2Q9BVS4 552 aaKnown RBP7.42□□□□□ -1.22
IFT88-201ENST00000319980 DLGAP2Q9P1A6 1054 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 RIMS3Q9UJD0 308 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 DTNAQ9Y4J8 743 aa7.42□□□□□ -1.22
IFT88-201ENST00000319980 PRSS51A0A1B0GVH4 220 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ASPDHA6ND91 283 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 C16orf96A6NNT2 1141 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 KPNA3O00505 521 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 TXNDC9O14530 226 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 TULP3O75386 442 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HIST1H2AGP0C0S8 130 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZCCHC18P0CG32 403 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SLC2A4P14672 509 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HIST1H2ADP20671 130 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 GRIA3P42263 894 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ST8SIA6P61647 398 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 EMX2Q04743 252 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ADGRE1Q14246 886 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PDCD4Q53EL6 469 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ADGRD2Q7Z7M1 963 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 TSPEARQ8WU66 669 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ELMO1Q92556 727 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 GATA6Q92908 595 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 RSPRY1Q96DX4 576 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HIST1H2AHQ96KK5 128 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HIST1H2AJQ99878 128 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 H2AFJQ9BTM1 129 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 TRIM54Q9BYV2 358 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SEMA6AQ9H2E6 1030 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ACTR8Q9H981 624 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CMTM6Q9NX76 183 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ITM2BQ9Y287 266 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 DENND4CQ5VZ89 1909 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 FADS2P1A8MWK0 482 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 LIN7AO14910 233 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PEX1O43933 1283 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SMNDC1O75940 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
IFT88-201ENST00000319980 CISD3P0C7P0 127 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 MSH3P20585 1137 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 RPL38P63173 70 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PLIN5Q00G26 463 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 MED21Q13503 144 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZXDCQ2QGD7 858 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 COQ5Q5HYK3 327 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CYP20A1Q6UW02 462 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 OSCP1Q8WVF1 389 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 NTMT1Q9BV86 223 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SLC12A9Q9BXP2 914 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CXorf56Q9H5V9 222 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZFP14Q9HCL3 533 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZIM2Q9NZV7 527 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ABCD2Q9UBJ2 740 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 DPP7Q9UHL4 492 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 FBXO10Q9UK96 956 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZNF490Q9ULM2 529 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 POLR3HQ9Y535 204 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 FAM234BA2RU67 622 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 DPPA5A6NC42 116 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 MAGEA13PA6NCF6 341 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 PABPN1LA6NDY0 278 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 OTOL1A6NHN0 477 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PRRT4C9JH25 899 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 PEX14O75381 377 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 EEDO75530 441 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 RECKO95980 971 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ADH1CP00326 375 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 RB1P06400 928 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 C8BP07358 591 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ELFN1P0C7U0 828 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 EBLN1P0CF75 366 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HLA-EP13747 358 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 UQCRBP14927 111 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 NFKBIAP25963 317 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 METAP1P53582 386 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 IRX1P78414 480 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PTGR1Q14914 329 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ACOX1Q15067 660 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 IMPG1Q17R60 797 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 ZNF284Q2VY69 593 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 PLA2G4EQ3MJ16 856 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms