RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TAF1AQ15573 450 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 CYP51A1Q16850 503 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 UGT3A2Q3SY77 523 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 OTUD3Q5T2D3 398 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 TRPV3Q8NET8 790 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 OR52B6Q8NGF0 335 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 DNAJB14Q8TBM8 379 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 EID2BQ96D98 161 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 CNDP2Q96KP4 475 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 FAM8A1Q9UBU6 413 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 USP22Q9UPT9 525 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 ARPC2O15144 300 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 VPS26AO75436 327 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 ACVR1Q04771 509 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 TMTC4Q5T4D3 741 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC16A12Q6ZSM3 486 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 PXYLP1Q8TE99 480 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 RAB2BQ8WUD1 216 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 TEX37Q96LM6 180 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 CTRCQ99895 268 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 FEM1AQ9BSK4 669 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 FUNDC2Q9BWH2 189 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 TTLL2Q9BWV7 592 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 SYTL2Q9HCH5 934 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF334Q9HCZ1 680 aaPredicted RBP15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 POLG2Q9UHN1 485 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 ZMYM5Q9UJ78 669 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 AQP12BA6NM10 295 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 WISP3O95389 354 aaPredicted RBP15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 COL6A1P12109 1028 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 IL7RP16871 459 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 JUNBP17275 347 aaPredicted RBP15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 CR2P20023 1033 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 DNAJB1P25685 340 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 ATP6V0D1P61421 351 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 INPP5AQ14642 412 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 TRIM60Q495X7 471 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 CTSL3PQ5NE16 218 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 ANKS6Q68DC2 871 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 AQP12AQ8IXF9 295 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 BEGAINQ9BUH8 593 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 AFF4Q9UHB7 1163 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 COL4A4P53420 1690 aaPredicted RBP15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 MYOFQ9NZM1 2061 aa15.29■□□□□ 0.04
SHROOM1-201ENST00000319854 FXYD1O00168 92 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ANGPT2O15123 496 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 HOXA2O43364 376 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 OR4F21O95013 312 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 CAPN3P20807 821 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 GPX3P22352 226 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 S100A1P23297 94 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 HTR1BP28222 390 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 TIGD2Q4W5G0 525 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 AGAP7PQ5VUJ5 663 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 GPSM1Q86YR5 675 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF599Q96NL3 588 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 DGCR6LQ9BY27 220 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ATP13A3Q9H7F0 1226 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 AKIP1Q9NQ31 210 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 PKP3Q9Y446 797 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 OGNP20774 298 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 RFC2P35250 354 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 GDF5P43026 501 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 HK3P52790 923 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 IL2P60568 153 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 DEFB103AP81534 67 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF846Q147U1 533 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 AAK1Q2M2I8 961 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 SGO1Q5FBB7 561 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ARMC12Q5T9G4 340 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 CRTC3Q6UUV7 619 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 FRA10AC1Q70Z53 315 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 SYVN1Q86TM6 617 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 KIAA1191Q96A73 305 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ALOXE3Q9BYJ1 711 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ERVK-11Q9UQG0 969 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 FAM47E-STBD1D6RA91 191 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 KERAO60938 352 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 HTR1AP08908 422 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 IFITM2Q01629 132 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 LCP2Q13094 533 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 PTRHD1Q6GMV3 140 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 HACD2Q6Y1H2 254 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 R3HCC1LQ7Z5L2 792 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 GPR150Q8NGU9 434 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 FATE1Q969F0 183 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 SEPHS2Q99611 448 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 CGREF1Q99674 301 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ADNPQ9H2P0 1102 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 ABCD2Q9UBJ2 740 aa15.28■□□□□ 0.04
SHROOM1-201ENST00000319854 PLXNA3P51805 1871 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 CNPP09543 421 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC6A2P23975 617 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 GABRR2P28476 465 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 PCYT1AP49585 367 aa15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-201ENST00000319854 DPY19L1Q2PZI1 675 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms