RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 GULP1Q9UBP9 304 aa13.79□□□□□ -0.2
MSRA-201ENST00000317173 OARD1Q9Y530 152 aa13.79□□□□□ -0.2
MSRA-201ENST00000317173 ANKRD12Q6UB98 2062 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 PRSS38A1L453 326 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 GMNCA6NCL1 334 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 H3BM21 787 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 KLK8O60259 260 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 DLX3O60479 287 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 MATN4O95460 622 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 SERPINE1P05121 402 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 FGF3P11487 239 aaPredicted RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 SERPINB5P36952 375 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 CDKL1Q00532 357 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 CHI3L2Q15782 390 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 PYCR3Q53H96 274 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 Q6ZSR6 202 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 ARMCX6Q7L4S7 300 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 IQCHQ86VS3 1027 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 GPSM1Q86YR5 675 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 RASGRP3Q8IV61 690 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 CFAP206Q8IYR0 622 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 OR6Y1Q8NGX8 325 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 FOPNLQ96NB1 174 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 ZNF317Q96PQ6 595 aaPredicted RBP13.78□□□□□ -0.2
MSRA-201ENST00000317173 TRIM54Q9BYV2 358 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 EPN3Q9H201 632 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
MSRA-201ENST00000317173 A8MT66 165 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 MEI4A8MW99 385 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 H0Y8X5 98 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 STX16-NPEPL1H3BU86 382 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 GFYI3L273 518 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 STX16O14662 325 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 SLC30A4O14863 429 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 MTHFD2P13995 350 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 BGNP21810 368 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 KCNC1P48547 511 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 STX3Q13277 289 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 LRP8Q14114 963 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 TGFBIQ15582 683 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 PPP1R3AQ16821 1122 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
MSRA-201ENST00000317173 ENPP7Q6UWV6 458 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 NAPRTQ6XQN6 538 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 VRK3Q8IV63 474 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 PDPRQ8NCN5 879 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 CEP76Q8TAP6 659 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 ASB11Q8WXH4 323 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 SNX19Q92543 992 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 HSPA12BQ96MM6 686 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 OR2M4Q96R27 311 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 SLC12A9Q9BXP2 914 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.21
MSRA-201ENST00000317173 FGF22Q9HCT0 170 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 SUFUQ9UMX1 484 aa13.77□□□□□ -0.21
MSRA-201ENST00000317173 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 TMEM114B3SHH9 223 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 SUPT3HB4E1H0 165 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 UBXN8O00124 270 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 FFAR2O15552 330 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 SNX2O60749 519 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 PSIP1O75475 530 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 SUPT3HO75486 399 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 CATP04040 527 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 S100BP04271 92 aaPredicted RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 VIMP08670 466 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 GFAPP14136 432 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 CYP2A7P20853 494 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 CLCNKAP51800 687 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 ALDH18A1P54886 795 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 AP1S2P56377 157 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 RACK1P63244 317 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 FOXK2Q01167 660 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 GABPB1Q06547 395 aaPredicted RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 WDR45BQ5MNZ6 344 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 METTL2BQ6P1Q9 378 aaKnown RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 UBE2R2Q712K3 238 aaPredicted RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 DGLUCYQ7Z3D6 616 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 TCAIMQ8N3R3 496 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 FBXO39Q8N4B4 442 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 FBXO15Q8NCQ5 510 aaPredicted RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 OR13H1Q8NG92 308 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 SKA2Q8WVK7 121 aaPredicted RBP13.76□□□□□ -0.21
MSRA-201ENST00000317173 DNASE2BQ8WZ79 361 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
MSRA-201ENST00000317173 KLHDC7BQ96G42 594 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms