RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 TSPYL5Q86VY4 417 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 TTC9Q92623 222 aa9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 CIDECQ96AQ7 238 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 GON7Q9BXV9 100 aa9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
RBFOX1-201ENST00000311745 SAGE2PA6NJ88 616 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 M0QZ92 97 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 AIM2O14862 343 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 PTP4A3O75365 173 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 WISP3O95389 354 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 HLA-DQB2P05538 268 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 APOA4P06727 396 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 C8BP07358 591 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 IL12RB1P42701 662 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 HARS2P49590 506 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 FCGRTP55899 365 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TNK2Q07912 1038 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 UGP2Q16851 508 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MAJINQ3KP22 176 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 AASDHQ4L235 1098 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TSTD2Q5T7W7 516 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 POMZP3Q6PJE2 187 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MAMDC2Q7Z304 686 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 P3H2Q8IVL5 708 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 BHLHE22Q8NFJ8 381 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 SH3RF2Q8TEC5 729 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MRGPRX2Q96LB1 330 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CPNE1Q99829 537 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TMEM245Q9H330 911 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CPNE5Q9HCH3 593 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MARCH5Q9NX47 278 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 ZNF106Q9H2Y7 1883 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TRBV23-1A0A0A0MS06 115 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 E2F8A0AVK6 867 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 OR6C65A6NJZ3 312 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 E7ENX8 843 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CTDSP2O14595 271 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 ADAM11O75078 769 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 GJB3O75712 270 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 F9P00740 461 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 IGLV3-27P01718 113 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 POU1F1P28069 291 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 KCNJ5P48544 419 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MAPKAPK2P49137 400 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 NUMBP49757 651 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 IFRD2Q12894 506 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 FAM219BQ5XKK7 198 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MSANTD2Q6P1R3 559 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CASC4Q6P4E1 433 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 SHQ1Q6PI26 577 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 OFCC1Q8IZS5 231 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CLYBLQ8N0X4 340 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TBC1D19Q8N5T2 526 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 DGCR6LQ9BY27 220 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 COG4Q9H9E3 785 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 DIABLOQ9NR28 239 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 COPG2Q9UBF2 871 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 TRHDEQ9UKU6 1024 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 DENND4CQ5VZ89 1909 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 IGLV3-10A0A075B6K4 115 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 F8W036 122 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 M0R3G1 203 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 RHOBTB1O94844 696 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 JCHAINP01591 159 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 BMP4P12644 408 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CPB1P15086 417 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 PCSK2P16519 638 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MSH3P20585 1137 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 IL12AP29459 219 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 GP5P40197 560 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 ACLYP53396 1101 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 SSTP61278 116 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CSNK2BP67870 215 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 GRTP1Q5TC63 336 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 GTF2IRD2BQ6EKJ0 949 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CEP68Q76N32 757 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 GTF2IRD2Q86UP8 949 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CAMK1DQ8IU85 385 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 PGBD5Q8N414 524 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 OR6F1Q8NGZ6 308 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 FOPNLQ96NB1 174 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 FCRL5Q96RD9 977 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 ACTR6Q9GZN1 396 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 PNPOQ9NVS9 261 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 KLHL8Q9P2G9 620 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 CNOT11Q9UKZ1 510 aaKnown RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 MTF2Q9Y483 593 aaPredicted RBP9.37□□□□□ -0.91
RBFOX1-201ENST00000311745 AP3D1O14617 1153 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 GMDSO60547 372 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 POLBP06746 335 aa9.36□□□□□ -0.91
RBFOX1-201ENST00000311745 SFTPCP11686 197 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms