RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 PDK3Q15120 406 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 SPESP1Q6UW49 350 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
PAAF1-201ENST00000310571 COL26A1Q96A83 441 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 REEP1Q9H902 201 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 NDUFA13Q9P0J0 144 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 RPS6KA6Q9UK32 745 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 NDRG2Q9UN36 371 aaKnown RBP13.41□□□□□ -0.26
PAAF1-201ENST00000310571 MYRFQ9Y2G1 1151 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 COQ6Q9Y2Z9 468 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 LOC285095A0A1B0GVY8 99 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 B4GALT3O60512 393 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PRPS2P11908 318 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 HOXC13P31276 330 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 FOLH1Q04609 750 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 SEMA3AQ14563 771 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PPP1R3AQ16821 1122 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
PAAF1-201ENST00000310571 UNC50Q53HI1 259 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PDE12Q6L8Q7 609 aaKnown RBP13.41□□□□□ -0.26
PAAF1-201ENST00000310571 ANKRD33Q7Z3H0 272 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 SLC22A12Q96S37 553 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PCDHAC1Q9H158 963 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
PAAF1-201ENST00000310571 RB1P06400 928 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ACRV1P26436 265 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 GSSP48637 474 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ALDH6A1Q02252 535 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ATAD3BQ5T9A4 648 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 MRPL43Q8N983 215 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 OR4A15Q8NGL6 344 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 TCEAL4Q96EI5 215 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 WDR83Q9BRX9 315 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CCDC106Q9BWC9 280 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 RIBC2Q9H4K1 309 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 FAM234BA2RU67 622 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CST1P01037 141 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 KLKB1P03952 638 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ADRA1AP35348 466 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SSR2P43308 183 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ASMTP46597 345 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CLCN4P51793 760 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 PTPN5P54829 565 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 UBE3AQ05086 875 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ISCA2Q86U28 154 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ACVR1CQ8NER5 493 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SMIM14Q96QK8 99 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 C1orf21Q9H246 121 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 A0A088AWK7 358 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 HEPACAM2A8MVW5 462 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SDHDO14521 159 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ZW10O43264 779 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 BPIP17213 487 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 AMD1P17707 334 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 ZNF10P21506 573 aaPredicted RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 OR4D1Q15615 310 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 TRIM74Q86UV6 250 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CHST14Q8NCH0 376 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 MDGA1Q8NFP4 955 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SLC39A3Q9BRY0 314 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CACNA2D2Q9NY47 1150 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 POP7O75817 140 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 OAS1P00973 400 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 C2orf80Q0P641 193 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SPRED3Q2MJR0 410 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 HTR3DQ70Z44 454 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 OR13J1Q8NGT2 312 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 UTP15Q8TED0 518 aaKnown RBP13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SMARCD2Q92925 531 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CIB1Q99828 191 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CEP44Q9C0F1 390 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 WDR26Q9H7D7 661 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
PAAF1-201ENST00000310571 SCN1AP35498 2009 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 FPGTO14772 594 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 XRCC1P18887 633 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-201ENST00000310571 HOXD9P28356 352 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-201ENST00000310571 CHN2P52757 468 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 CCNYL2Q5T2Q4 361 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 LRRC70Q7Z2Q7 622 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 ZNF513Q8N8E2 541 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-201ENST00000310571 SLC2A11Q9BYW1 496 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 PPM1HQ9ULR3 514 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 PI15O43692 258 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 PFDN1O60925 122 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 RASGRP1O95267 797 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 NCK1P16333 377 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 CTSOP43234 321 aaPredicted RBP13.39□□□□□ -0.27
PAAF1-201ENST00000310571 BDKRB1P46663 353 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 PREPP48147 710 aa13.39□□□□□ -0.27
PAAF1-201ENST00000310571 ARF5P84085 180 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms