RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 NANSQ9NR45 359 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM5Q9Y2B1 443 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PCDHGB6Q9Y5F9 930 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DOPEY2Q9Y3R5 2298 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 C2orf74A8MZ97 194 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 G3V2T6 193 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OR10H3O60404 316 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ITGA10O75578 1167 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KRT36O76013 467 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SEC24DO94855 1032 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HRGP04196 525 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HNRNPCP07910 306 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC18A1P54219 525 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DLG2Q15700 870 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TRIM16LQ309B1 348 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RAD9BQ6WBX8 426 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF786Q8N393 782 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OR6Y1Q8NGX8 325 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MTMR8Q96EF0 704 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 QKIQ96PU8 341 aaKnown RBP eCLIP3.14□□□□□ -1.915e-13■■■■□ 20.4
CLOCK-201ENST00000309964 POMKQ9H5K3 350 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NSUN3Q9H649 340 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IL1RL2Q9HB29 575 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ENTPD2Q9Y5L3 495 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ABCA1O95477 2261 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DDX60LQ5H9U9 1706 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NHSQ6T4R5 1651 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CYB5BO43169 146 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF208O43345 1280 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RENP00797 406 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TRBC1P01850 177 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CHRNGP07510 517 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NT5EP21589 574 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SSTR1P30872 391 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RAB28P51157 221 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ARPC4P59998 168 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NFKB2Q00653 900 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ACY1Q03154 408 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CPSF6Q16630 551 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DECR1Q16698 335 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DUPD1Q68J44 220 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PYHIN1Q6K0P9 492 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CRELD2Q6UXH1 353 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HSDL2Q6YN16 418 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RIPOR1Q6ZS17 1223 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TMCO2Q7Z6W1 182 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LONP2Q86WA8 852 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LIX1LQ8IVB5 337 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MREGQ8N565 214 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM46DQ8NEK8 389 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TSPEARQ8WU66 669 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KBTBD7Q8WVZ9 684 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 COX4I2Q96KJ9 171 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PDZD7Q9H5P4 517 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 POPDC3Q9HBV1 291 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 INSL5Q9Y5Q6 135 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IRS2Q9Y4H2 1338 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 UPK3BL1B0FP48 263 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 UPK3BL2E5RIL1 263 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LOC110117498-PIK3R3F6TDL0 507 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MRASO14807 208 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PRODHO43272 600 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ATMINO43313 823 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RNGTTO60942 597 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LRCH4O75427 683 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IFNA6P05013 189 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CAPN1P07384 714 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF3P17036 446 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CTPS1P17812 591 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FEN1P39748 380 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 GRIA2P42262 883 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PSMD8P48556 350 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KHKP50053 298 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGAP1Q07960 439 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MTF1Q14872 753 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ARL6IP1Q15041 203 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NET1Q7Z628 596 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 JAZF1Q86VZ6 243 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF366Q8N895 744 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OR7A2PQ8NGA2 310 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OR52K1Q8NGK4 314 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM81AQ8TBF8 368 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 GATAD2BQ8WXI9 593 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FIG4Q92562 907 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PIK3R3Q92569 461 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FCGR1BQ92637 280 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF75CPQ92670 426 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RAB39BQ96DA2 213 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CELF6Q96J87 481 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ALG9Q9H6U8 611 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ABCB8Q9NUT2 735 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NUDT5Q9UKK9 219 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC27A5Q9Y2P5 690 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CPQQ9Y646 472 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CAPN6Q9Y6Q1 641 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 EP300Q09472 2414 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RGPD4Q7Z3J3 1758 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF879B4DU55 563 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FOXE1O00358 373 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms