RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 EFHC1Q5JVL4 640 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TEDDM1Q5T9Z0 273 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 FAXCQ5TGI0 409 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 C1orf146Q5VVC0 180 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ARHGAP17Q68EM7 881 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 VASNQ6EMK4 673 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 LRRC8BQ6P9F7 803 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 C19orf48Q6RUI8 117 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CDHR3Q6ZTQ4 885 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 DHDDSQ86SQ9 333 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SETD3Q86TU7 594 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 UNC93AQ86WB7 457 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 METTL23Q86XA0 190 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 MARCH9Q86YJ5 346 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SLC41A1Q8IVJ1 513 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 DCP1BQ8IZD4 617 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ST13P4Q8IZP2 240 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 THEM5Q8N1Q8 247 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PQLC3Q8N755 202 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 EMC1Q8N766 993 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CATSPER1Q8NEC5 780 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 OR6Y1Q8NGX8 325 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PCDH19Q8TAB3 1148 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PPP1R14CQ8TAE6 165 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PPP4R1Q8TF05 950 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 UCMAQ8WVF2 138 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 NEU4Q8WWR8 484 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CENPIQ92674 756 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ERLEC1Q96DZ1 483 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CFAP36Q96G28 342 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RILPQ96NA2 401 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PANX3Q96QZ0 392 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PEBP4Q96S96 227 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 KCNK16Q96T55 309 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ACBD6Q9BR61 282 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 TRIM4Q9C037 500 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 ELOVL4Q9GZR5 314 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 CAPN10Q9HC96 672 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 SMYD2Q9NRG4 433 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PLK2Q9NYY3 685 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 VPS28Q9UK41 221 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 PRPF19Q9UMS4 504 aaKnown RBP4.87□□□□□ -1.63
CKS1B-201ENST00000308987 NEUROG3Q9Y4Z2 214 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 X6R8D5 127 aa4.87□□□□□ -1.63
CKS1B-201ENST00000308987 RELNP78509 3460 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8QA0A0J9YX86 632 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 A0A1W2PQF6 199 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 TCRBV5S2A0A599 114 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MAGEB16A2A368 324 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8OA6NCC3 632 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF840PA6NDX5 716 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ERI2A8K979 691 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CXorf49A8MYA2 514 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 GOLGA8NF8WBI6 632 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SLCO1B7G3V0H7 640 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 H0YJX3 145 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 AP3B1O00203 1094 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 DENRO43583 198 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MAFKO60675 156 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 OPHN1O60890 802 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 KAT7O95251 611 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 APRTP07741 180 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PDGFRBP09619 1106 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 FAM163BP0C2L3 166 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 FGF3P11487 239 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 UQCRBP14927 111 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 GABRG2P18507 467 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PGAM1P18669 254 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 LMO1P25800 156 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPRP35270 261 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PEX19P40855 299 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MAGEA11P43364 429 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ACADSBP45954 432 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SLC1A6P48664 564 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 HSPA13P48723 471 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 POLD2P49005 469 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 TUBP50607 506 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF135P52742 658 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CSE1LP55060 971 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SESN3P58005 492 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SLC7A9P82251 487 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MRPS21P82921 87 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 KDSRQ06136 332 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SCAPQ12770 1279 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CDC16Q13042 620 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 LSAMPQ13449 338 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MED21Q13503 144 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CUL3Q13618 768 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 HERC3Q15034 1050 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ADRM1Q16186 407 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms