RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SNX32Q86XE0 403 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 CFAP52Q8N1V2 620 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 OR52K1Q8NGK4 314 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 OR6Y1Q8NGX8 325 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 OR2W6PQ8NHA6 318 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 PSMG2Q969U7 264 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 NUS1Q96E22 293 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 GRIP2Q9C0E4 1043 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 IKZF2Q9UKS7 526 aa8.21□□□□□ -1.09
PCDHB1-201ENST00000306549 HYKKA2RU49 373 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 RIPK2O43353 540 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 PEX10O60683 326 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SAGP10523 405 aaPredicted RBP8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 QPRTQ15274 297 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 DLG2Q15700 870 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 DUS1LQ6P1R4 473 aaKnown RBP8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 UNC5BQ8IZJ1 945 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR156Q8NFN8 814 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 OR4A15Q8NGL6 344 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 DNASE1L2Q92874 299 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SEMA4BQ9NPR2 832 aaPredicted RBP8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 HAO1Q9UJM8 370 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SPEF1Q9Y4P9 236 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 TRIM38O00635 465 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 FSCN2O14926 492 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 TGDSO95455 350 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 APBB3O95704 486 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 BICRALQ6AI39 1079 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 LRRTM4Q86VH4 590 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 OR2AP1Q8NGE2 309 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 LCN9Q8WX39 176 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 CPNE2Q96FN4 548 aaPredicted RBP8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 ART5Q96L15 291 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 MIPEPQ99797 713 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 RMI1Q9H9A7 625 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 GJB5O95377 273 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 AGR2O95994 175 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 GNALP38405 381 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 KCNJ5P48544 419 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 AP3S2P59780 193 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 FOXM1Q08050 763 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SNTA1Q13424 505 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 PYDC2Q56P42 97 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 THAP5Q7Z6K1 395 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 GPR180Q86V85 440 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SPOCK2Q92563 424 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 ADAMTS10Q9H324 1103 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SERINC1Q9NRX5 453 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 NUDT4Q9NZJ9 180 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 SNX7Q9UNH6 387 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 GMPPBQ9Y5P6 360 aa8.21□□□□□ -1.1
PCDHB1-201ENST00000306549 UPK3BL1B0FP48 263 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 UPK3BL2E5RIL1 263 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GSRP00390 522 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TYRP14679 529 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 NT5EP21589 574 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PDHA2P29803 388 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SQLEQ14534 574 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PIK3R6Q5UE93 754 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PGBD2Q6P3X8 592 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 OR2AJ1Q8NGZ0 328 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZDHHC12Q96GR4 267 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PLGRKTQ9HBL7 147 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 NUDT5Q9UKK9 219 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MGAMO43451 1857 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CEP250Q9BV73 2442 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 RIIAD1A6NNX1 92 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DFNA5O60443 496 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 HGFP14210 728 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MLLT6P55198 1093 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PPP2R2BQ00005 443 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 HEPACAMQ14CZ8 416 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 NEDD8Q15843 81 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 RFX4Q33E94 735 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GRASPQ7Z6J2 395 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 SLC9B2Q86UD5 537 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 HMGB4Q8WW32 186 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PANX1Q96RD7 426 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MYOCQ99972 504 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 MUC13Q9H3R2 512 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CERS4Q9HA82 394 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CALML5Q9NZT1 146 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 RGS17Q9UGC6 210 aaPredicted RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 BRCA1P38398 1863 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ZDBF2Q9HCK1 2354 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GABRDO14764 452 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 YKT6O15498 198 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 CFIP05156 583 aa8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
PCDHB1-201ENST00000306549 GDI2P50395 445 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms