RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 JCHAINP01591 159 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CYBBP04839 570 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FASP25445 335 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SLC15A1P46059 708 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TM4SF4P48230 202 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CLCN7P51798 805 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 E2F2Q14209 437 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PTPRCAPQ14761 206 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RUNDC3AQ59EK9 446 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 C6orf136Q5SQH8 315 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 C9orf131Q5VYM1 1079 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CPZQ66K79 652 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CASC4Q6P4E1 433 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SBSNQ6UWP8 590 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LDB1Q86U70 411 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 HID1Q8IV36 788 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TTC30BQ8N4P2 665 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ATPAF2Q8N5M1 289 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 C2orf69Q8N8R5 385 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 BRSK1Q8TDC3 778 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ST6GAL2Q96JF0 529 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TMEM209Q96SK2 561 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CDK5RAP1Q96SZ6 601 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 ACOX2Q99424 681 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 ZYG11BQ9C0D3 744 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ACOT13Q9NPJ3 140 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TLK1Q9UKI8 766 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 IFT52Q9Y366 437 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CCDC88CQ9P219 2028 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FAM234BA2RU67 622 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 MANSC4A6NHS7 340 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 OR6C75A6NL08 312 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 B3GALT4O96024 378 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 MT-ND1P03886 318 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 NTRK1P04629 796 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 HOXD9P28356 352 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 CTGFP29279 349 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 HTR6P50406 440 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 STC1P52823 247 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PLK1P53350 603 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 KCNAB2Q13303 367 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RAPSNQ13702 412 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SLC39A12Q504Y0 691 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FAM209AQ5JX71 171 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FAM171A1Q5VUB5 890 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 STEAP3Q658P3 488 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TMEM214Q6NUQ4 689 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 USP43Q70EL4 1123 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 EFL1Q7Z2Z2 1120 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 LIX1LQ8IVB5 337 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 DHRSXQ8N5I4 330 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 Q8N9G6 341 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 FAM83FQ8NEG4 500 aaPredicted RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 BPIFB6Q8NFQ5 453 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 DNAJB8Q8NHS0 232 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PPP1R14CQ8TAE6 165 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 APOBEC4Q8WW27 367 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 WBP1Q96G27 269 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ITCHQ96J02 903 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CELF6Q96J87 481 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 C1orf50Q9BV19 199 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FICDQ9BVA6 458 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GABARAPL3Q9BY60 117 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LRRC3Q9BY71 257 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 MAGIXQ9H6Y5 334 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 NMUR1Q9HB89 426 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CYP4F12Q9HCS2 524 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 FZD3Q9NPG1 666 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TXNDC16Q9P2K2 825 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 AASSQ9UDR5 926 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LSM2Q9Y333 95 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 PPIL1Q9Y3C6 166 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ZNF711Q9Y462 761 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 A3GALT2U3KPV4 340 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TCF20Q9UGU0 1960 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 A0A0X1KG70 313 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SLC35F4A4IF30 521 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CFAP99D6REC4 459 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 J3KR12 359 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 AZIN1O14977 448 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 KMOO15229 486 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 NUAK1O60285 661 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PRAMEF4O60810 478 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TULP3O75386 442 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RPP40O75818 363 aaKnown RBP5.35□□□□□ -1.55
VPS50-202ENST00000305866 UPK1BO75841 260 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PAPLNO95428 1278 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 RAP2AP10114 183 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 LIPAP38571 399 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 SLC19A1P41440 591 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GSSP48637 474 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GAS1P54826 345 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 PTPN5P54829 565 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 CDH13P55290 713 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 WNT3P56703 355 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 ZNF33BQ06732 778 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 TRAF2Q12933 501 aa5.35□□□□□ -1.55
VPS50-202ENST00000305866 GPR50Q13585 617 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms