RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 MTG1Q9BT17 334 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC25A51Q9H1U9 297 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TBC1D24Q9ULP9 559 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TMA7Q9Y2S6 64 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 BORCS7-ASMTA0A0B4J1R7 106 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 MT-ND2P03891 347 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SRCP12931 536 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 MIPP30301 263 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KLHL26Q53HC5 615 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 LPCAT4Q643R3 524 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 LPCAT3Q6P1A2 487 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 C1orf94Q6P1W5 598 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC27A1Q6PCB7 646 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CUZD1Q86UP6 607 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CYP2W1Q8TAV3 490 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 UTP15Q8TED0 518 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC38A4Q969I6 547 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 RERGQ96A58 199 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 BORCS7Q96B45 105 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ISOC1Q96CN7 298 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF285Q96NJ3 590 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 WRNIP1Q96S55 665 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 NKIRAS2Q9NYR9 191 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SRP68Q9UHB9 627 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FBXO5Q9UKT4 447 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CDH10Q9Y6N8 788 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 V9GYQ6 96 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 C5P01031 1676 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 PI4KAP42356 2102 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 A0A075B6Q4 140 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 URADA6NGE7 173 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 WASHC1A8K0Z3 465 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 WASH3PC4AMC7 463 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ANKRD65E5RJM6 399 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 GTPBP1O00178 669 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 RDH16O75452 317 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CSF3P09919 207 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 UNGP13051 313 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 GYS1P13807 737 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 IGFBP5P24593 272 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 RYKP34925 604 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 UGT2B10P36537 528 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 PBX3P40426 434 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KIR3DL1P43629 444 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC9A3P48764 834 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TGM4P49221 684 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TAGLNQ01995 201 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ST3GAL4Q11206 333 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 PROX2Q3B8N5 592 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 WASH2PQ6VEQ5 465 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ATG14Q6ZNE5 492 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 LAPTM4BQ86VI4 370 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TSPYL5Q86VY4 417 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 LIX1LQ8IVB5 337 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FAM109AQ8N4B1 249 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 METTL6Q8TCB7 284 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ZSWIM3Q96MP5 696 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TTLL2Q9BWV7 592 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TMEM121BQ9BXQ6 578 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TTYH1Q9H313 450 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ATXN3LQ9H3M9 355 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ZFYVE28Q9HCC9 887 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ARL8BQ9NVJ2 186 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 PAK1IP1Q9NWT1 392 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF222Q9UK12 451 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TIMM8BQ9Y5J9 83 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 MPDZO75970 2070 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 A0A087WZ62 844 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TTLL8A6PVC2 850 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TPP1O14773 563 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC16A5O15375 505 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 DPM1O60762 260 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 TFRCP02786 760 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FABP3P05413 133 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 C8GP07360 202 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 ERCC1P07992 297 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 NTSP30990 170 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 DNASE1L1P49184 302 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 NAGLUP54802 743 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 UBE2SQ16763 222 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FAM122CQ6P4D5 195 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KCNT2Q6UVM3 1135 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 OAFQ86UD1 273 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 MS4A15Q8N5U1 240 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 SLC2A14Q8TDB8 520 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 HCAR2Q8TDS4 363 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KIF12Q96FN5 646 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 FUBP3Q96I24 572 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 KCTD7Q96MP8 289 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 AGAP3Q96P47 875 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 PELOQ9BRX2 385 aaKnown RBP5.17□□□□□ -1.58
SCN1A-201ENST00000303395 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 IL1RL2Q9HB29 575 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 GNG13Q9P2W3 67 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 DUSP10Q9Y6W6 482 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CCDC88AQ3V6T2 1871 aa5.17□□□□□ -1.58
SCN1A-201ENST00000303395 CCRL2O00421 344 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 OR10H2O60403 315 aa5.16□□□□□ -1.58
SCN1A-201ENST00000303395 TNFRSF21O75509 655 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms