RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 FTLP02792 175 aaPredicted RBP6.25□□□□□ -1.41
ITGB1-201ENST00000302278 TPM2P07951 284 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 CD48P09326 243 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 CBSLP0DN79 551 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 HLA-DPA1P20036 260 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 CBSP35520 551 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 GLRBP48167 497 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 SMTNL2Q2TAL5 461 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 CREBRFQ8IUR6 639 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 C19orf47Q8N9M1 422 aaKnown RBP6.25□□□□□ -1.41
ITGB1-201ENST00000302278 HM13Q8TCT9 377 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 SPSB2Q99619 263 aa6.25□□□□□ -1.41
ITGB1-201ENST00000302278 DCHS2Q6V1P9 2916 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 IGLV3-12A0A075B6K2 115 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 A6NL46 340 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 C2orf74A8MZ97 194 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 BTN3A3O00478 584 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 COX6B1P14854 86 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PREPP48147 710 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 Q0VFX4 171 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 MMRN1Q13201 1228 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PRAMEF17Q5VTA0 474 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 FAM69BQ5VUD6 431 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 DUS1LQ6P1R4 473 aaKnown RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 SPESP1Q6UW49 350 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 FAM180AQ6UWF9 173 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 B4GALNT4Q76KP1 1039 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 HSPH1Q92598 858 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 DLG3Q92796 817 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 SUCOQ9UBS9 1254 aaKnown RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 FBXL4Q9UKA2 621 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 DNAJC16Q9Y2G8 782 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 LCA5LO95447 670 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 HTR1EP28566 365 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ADORA2A-AS1P86434 159 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PRKD1Q15139 912 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 TAZQ16635 292 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 GPRC6AQ5T6X5 926 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 OVCH1Q7RTY7 1134 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 NT5DC3Q86UY8 548 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 TRAPPC5Q8IUR0 188 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PLD5Q8N7P1 536 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 HEXDCQ8WVB3 486 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 HAS2Q92819 552 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■■■■ 27.5
ITGB1-201ENST00000302278 ZNF653Q96CK0 615 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 TLR10Q9BXR5 811 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 MCCC2Q9HCC0 563 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ARFGAP3Q9NP61 516 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 OLAHQ9NV23 265 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 HS3ST3B1Q9Y662 390 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 POLEQ07864 2286 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 AURKAO14965 403 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 MTX2O75431 263 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 JRKO75564 520 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 FKBP9O95302 570 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 CYC1P08574 325 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 OTX2P32243 289 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ITKQ08881 620 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 MSLNQ13421 630 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ALS2CLQ60I27 953 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 ARMC6Q6NXE6 501 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 SARM1Q6SZW1 724 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 SYN2Q92777 582 aaPredicted RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PPM1MQ96MI6 270 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 OR2A14Q96R47 310 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 TAAR6Q96RI8 345 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 EPS8L2Q9H6S3 715 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 LUC7LQ9NQ29 371 aaKnown RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 PTRH2Q9Y3E5 179 aaKnown RBP6.24□□□□□ -1.41
ITGB1-201ENST00000302278 DNHD1Q96M86 4753 aa6.24□□□□□ -1.41
ITGB1-201ENST00000302278 NBASA2RRP1 2371 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 TRBV5-4A0A0C4DH59 114 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 MASP2O00187 686 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 PRICKLE3O43900 615 aaPredicted RBP6.23□□□□□ -1.41
ITGB1-201ENST00000302278 TNFSF10P50591 281 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 EMP3P54852 163 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 GBE1Q04446 702 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 PRKAA1Q13131 559 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 ZIC1Q15915 447 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 CAMK4Q16566 473 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 TUBB8Q3ZCM7 444 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 NKAIN1Q4KMZ8 207 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 TMEM220Q6QAJ8 160 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 ISLR2Q6UXK2 745 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 CDH24Q86UP0 819 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 VPS50Q96JG6 964 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 C12orf66Q96MD2 445 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 HAUS4Q9H6D7 363 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 DLL4Q9NR61 685 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 SOHLH2Q9NX45 425 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 TNFRSF10DQ9UBN6 386 aa6.23□□□□□ -1.41
ITGB1-201ENST00000302278 NDOR1Q9UHB4 597 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms