RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PON2Q15165 354 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 OR5K1Q8NHB7 308 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 AZGP1P25311 298 aaKnown RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 AKT1P31749 480 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 GABARAPL2P60520 117 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 PWP1Q13610 501 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF404Q494X3 552 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 VARS2Q5ST30 1063 aaKnown RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 CES5AQ6NT32 575 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 Q6ZPB1 254 aaPredicted RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 CYP4Z1Q86W10 505 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 LINC01465Q8N7H1 131 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 NETO1Q8TDF5 533 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 EEF1AKMT1Q8WVE0 214 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 SLC13A3Q8WWT9 602 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 DPF3Q92784 378 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 CHCHD6Q9BRQ6 235 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 AARSD1Q9BTE6 412 aaKnown RBP14.42□□□□□ -0.1
COL6A2-201ENST00000300527 DPY30Q9C005 99 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 RBPJLQ9UBG7 517 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF451Q9Y4E5 1061 aa14.42□□□□□ -0.1
COL6A2-201ENST00000300527 MOXD2PA6NHM9 499 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 RGS5O15539 181 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 LDB2O43679 373 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 CACNG3O60359 315 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 LRATO95237 230 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 APOA1P02647 267 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 TIAL1Q01085 375 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF235Q14590 738 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 PTPRRQ15256 657 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ALFQ53S48 1182 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ZRANB3Q5FWF4 1079 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 COQ5Q5HYK3 327 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 TPRG1LQ5T0D9 272 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 SVOPQ8N4V2 548 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 OR6J1Q8NGC5 347 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 OR4K2Q8NGD2 314 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 FUBP1Q96AE4 644 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 CEP19Q96LK0 163 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 KCNS3Q9BQ31 491 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 BEX2Q9BXY8 128 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 PRRG3Q9BZD7 231 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 TFB2MQ9H5Q4 396 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 SYTL2Q9HCH5 934 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 PDP1Q9P0J1 537 aaPredicted RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 TRMT6Q9UJA5 497 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 SNX6Q9UNH7 406 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 EIF3LQ9Y262 564 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 PKP3Q9Y446 797 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 HS3ST4Q9Y661 456 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 DARSP14868 501 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 GDF5P43026 501 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 BRCC3P46736 316 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ARPP19P56211 112 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 NFKB2Q00653 900 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 P3H2Q8IVL5 708 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ZDHHC21Q8IVQ6 265 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 KIAA1191Q96A73 305 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 EGFL8Q99944 293 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 SLIRPQ9GZT3 109 aaKnown RBP14.41□□□□□ -0.1
COL6A2-201ENST00000300527 NECTIN3Q9NQS3 549 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 ZIM2Q9NZV7 527 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 PCTPQ9UKL6 214 aa14.41□□□□□ -0.1
COL6A2-201ENST00000300527 A0A096LPI6 279 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 IRAK2O43187 625 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 DYRK3O43781 588 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 EFNA1P20827 205 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 GADD45AP24522 165 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 C21orf33P30042 268 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 NDUFA5Q16718 116 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 CEP68Q76N32 757 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 TTC29Q8NA56 475 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 GPR152Q8TDT2 470 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 IMP4Q96G21 291 aaKnown RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 Q96MT0 163 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 OR52E6Q96RD3 313 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 TTYH2Q9BSA4 534 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ZBED2Q9BTP6 218 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 SPON2Q9BUD6 331 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 CCRL2O00421 344 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 CREG1O75629 220 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 OR4Q2P0C623 313 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 MSH3P20585 1137 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ABRAXAS2Q15018 415 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 GPR153Q6NV75 609 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ALKAL1Q6UXT8 129 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 HORMAD1Q86X24 394 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 RTL3Q8N8U3 475 aaKnown RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 DHRS1Q96LJ7 313 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF300Q96RE9 604 aaPredicted RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 BBS2Q9BXC9 721 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 FARSBQ9NSD9 589 aaKnown RBP14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ERVK13-1Q9NX77 482 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 ZNF221Q9UK13 617 aa14.4□□□□□ -0.1
COL6A2-201ENST00000300527 A0A1W2PQ67 120 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms