RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 JRKO75564 520 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PRLP01236 227 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 GKP32189 559 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 RFC2P35250 354 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ERVK-8P63133 956 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ACVR1Q04771 509 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 DSC1Q08554 894 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PTGR1Q14914 329 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CCDC58Q4VC31 144 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 SFRP1Q8N474 314 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PROKR1Q8TCW9 393 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 ITPKCQ96DU7 683 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 DGCR6LQ9BY27 220 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 CCDC90BQ9GZT6 254 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 MAGEH1Q9H213 219 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LATS2Q9NRM7 1088 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 TBC1D14Q9P2M4 693 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 LIMD1Q9UGP4 676 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 PKP3Q9Y446 797 aa13.23□□□□□ -0.29
CTDP1-202ENST00000299543 VPS4BO75351 444 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 MATN4O95460 622 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 RPS17P08708 135 aaKnown RBP13.22□□□□□ -0.29
CTDP1-202ENST00000299543 TTPAP49638 278 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 MRPS15P82914 257 aaKnown RBP13.22□□□□□ -0.29
CTDP1-202ENST00000299543 RCAN2Q14206 197 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 TYSND1Q2T9J0 566 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 RFTN2Q52LD8 501 aaPredicted RBP13.22□□□□□ -0.29
CTDP1-202ENST00000299543 CTSL3PQ5NE16 218 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 Q6ZSR9 355 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 KCTD8Q6ZWB6 473 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 GALNT7Q86SF2 657 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 OR4F6Q8NGB9 312 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 CD200R1Q8TD46 325 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 SEPT8Q92599 483 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 IPPKQ9H8X2 491 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 ITM2CQ9NQX7 267 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 U3KQV3 271 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 SLC38A8A6NNN8 435 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 NOBOXO60393 691 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 GPIP06744 558 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 ALDH4A1P30038 563 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 RACK1P63244 317 aaKnown RBP13.22□□□□□ -0.29
CTDP1-202ENST00000299543 SLC13A2Q13183 592 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 HS3ST5Q8IZT8 346 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 OR10A6Q8NH74 314 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 MUS81Q96NY9 551 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 TRIB3Q96RU7 358 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 CSF3RQ99062 836 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 MGME1Q9BQP7 344 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 BOCQ9BWV1 1114 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 TDRD1Q9BXT4 1180 aaKnown RBP13.22□□□□□ -0.29
CTDP1-202ENST00000299543 ADGRE3Q9BY15 652 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 GIMAP4Q9NUV9 329 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 PCDHB7Q9Y5E2 793 aa13.22□□□□□ -0.29
CTDP1-202ENST00000299543 KLKB1P03952 638 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 OR1D2P34982 312 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 SUOXP51687 545 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 FCGRTP55899 365 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 IRF5Q13568 498 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 MOGQ16653 247 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 IMPG1Q17R60 797 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 INTS11Q5TA45 600 aaKnown RBP13.21□□□□□ -0.29
CTDP1-202ENST00000299543 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 TBC1D21Q8IYX1 336 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 ELMO1Q92556 727 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 BEGAINQ9BUH8 593 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 BDH2Q9BUT1 245 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 PDFQ9HBH1 243 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 FAM8A1Q9UBU6 413 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 CAPGP40121 348 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 SLC11A1P49279 550 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 RHOAP61586 193 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 CHRNB3Q05901 458 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 PIGFQ07326 219 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 ABRAXAS2Q15018 415 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 OXA1LQ15070 435 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 ATP6AP1Q15904 470 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 SLC36A3Q495N2 470 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 CYP20A1Q6UW02 462 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 DBF4BQ8NFT6 615 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 COQ7Q99807 217 aa13.21□□□□□ -0.29
CTDP1-202ENST00000299543 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
CTDP1-202ENST00000299543 K7ERQ8 282 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 E2F3O00716 465 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 ACOX3O15254 700 aa13.21□□□□□ -0.3
CTDP1-202ENST00000299543 DFNA5O60443 496 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms