RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ACP5P13686 325 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 ATP1B2P14415 290 aaPredicted RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 BRAFP15056 766 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 ZNF7P17097 686 aaPredicted RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 RPS3P23396 243 aaKnown RBP eCLIP5.79□□□□□ -1.48
SSX3-201ENST00000298396 HTR1BP28222 390 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 AKT1P31749 480 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 LEPRP48357 1165 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 PRLHRP49683 370 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 PPARDQ03181 441 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 MGAT5Q09328 741 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 PTK2BQ14289 1009 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 NFE2L1Q14494 772 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 ITIH4Q14624 930 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 KBTBD12Q3ZCT8 623 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 FASTKD1Q53R41 847 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 DBX2Q6ZNG2 339 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 C3orf62Q6ZUJ4 267 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 CYS1Q717R9 158 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 GALNT7Q86SF2 657 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 LRRTM4Q86VH4 590 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 VRK3Q8IV63 474 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 KRT222Q8N1A0 295 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 GIMAP7Q8NHV1 300 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 GDAP1Q8TB36 358 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 BAHD1Q8TBE0 780 aaPredicted RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 PATE1Q8WXA2 126 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 LINC00615Q96LM1 132 aaPredicted RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 COPS8Q99627 209 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 ZDHHC5Q9C0B5 715 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 SPATS2LQ9NUQ6 558 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 VTI1BQ9UEU0 232 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 MTRF1LQ9UGC7 380 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 APOBEC3BQ9UH17 382 aaKnown RBP5.79□□□□□ -1.48
SSX3-201ENST00000298396 FBXO5Q9UKT4 447 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 KCNK6Q9Y257 313 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 CRYL1Q9Y2S2 319 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 AKAP13Q12802 2813 aa5.79□□□□□ -1.48
SSX3-201ENST00000298396 PRAMEF33A0A0G2JMD5 474 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 LOC100289279A0A1B0GTE1 492 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MEGF11A6BM72 1044 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 C4orf47A7E2U8 309 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 GPR89AB7ZAQ6 455 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 LMO7DNF2Z398 122 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PRMT5O14744 637 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 KMOO15229 486 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 YY2O15391 372 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 FFAR2O15552 330 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 AQP9O43315 295 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 RIPK2O43353 540 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PCDHGA12O60330 932 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NOBOXO60393 691 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MAGEC1O60732 1142 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NIPSNAP2O75323 286 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 POP7O75817 140 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 AP2A2O94973 939 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 WISP3O95389 354 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 TNFP01375 233 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 SHBGP04278 402 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 SYPP08247 313 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ABHD2P08910 425 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 GSTA2P09210 222 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 GPR89BP0CG08 455 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MYF5P13349 255 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ITGB6P18564 788 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PAMP19021 973 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MSH3P20585 1137 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 KELP23276 732 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 AOAHP28039 575 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PDHA2P29803 388 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PBLDP30039 288 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 FMO4P31512 558 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CCR7P32248 378 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PLA2G5P39877 138 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NSG1P42857 185 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PREPP48147 710 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TTPAP49638 278 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ARL4DP49703 201 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CSRP3P50461 194 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CCT8P50990 548 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CLCN7P51798 805 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CLCNKAP51800 687 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PMS2P54278 862 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ADARP55265 1226 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 CDKN2DP55273 166 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 EIF3BP55884 814 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 ARHGAP8P85298 464 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 DMPKQ09013 629 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 THOC5Q13769 683 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 GBX1Q14549 363 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 DEFB133Q30KQ1 61 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 AASDHQ4L235 1098 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 STPG1Q5TH74 334 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 LYPLAL1Q5VWZ2 237 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MRNIPQ6NTE8 343 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ZNF449Q6P9G9 518 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 SLC30A9Q6PML9 568 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 IL27RAQ6UWB1 636 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms