RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ANHXE9PGG2 379 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 TSPAN6O43657 245 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 VPS4BO75351 444 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 WFS1O76024 890 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 OR4F21O95013 312 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 GPR1P46091 355 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 RPIAP49247 311 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 SLC25A3Q00325 362 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CDKL1Q00532 357 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CYLC2Q14093 348 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 ASB11Q8WXH4 323 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 TRIM54Q9BYV2 358 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 CD244Q9BZW8 370 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 ZCCHC2Q9C0B9 1178 aaKnown RBP13.97□□□□□ -0.17
C9orf3-202ENST00000297979 PARVBQ9HBI1 364 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 ARL15Q9NXU5 204 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 OPTCQ9UBM4 332 aa13.97□□□□□ -0.17
C9orf3-202ENST00000297979 K7EQS6 105 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 OR7A17O14581 309 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SLC16A5O15375 505 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 RNASEH1O60930 286 aaKnown RBP13.96□□□□□ -0.17
C9orf3-202ENST00000297979 OTCP00480 354 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 LINC00032P0C843 101 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 DRD3P35462 400 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 TIE1P35590 1138 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-202ENST00000297979 KIR2DL1P43626 348 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SEC13P55735 322 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ERVPABLB-1P60509 514 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CST6Q15828 149 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 WASHC2DQ5SRD0 308 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 MBOAT1Q6ZNC8 495 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 MPP4Q96JB8 637 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 THTPAQ9BU02 230 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 IPPKQ9H8X2 491 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 POLG2Q9UHN1 485 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 TMCC3Q9ULS5 477 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ANGPTL3Q9Y5C1 460 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 PABPN1LA6NDY0 278 aaKnown RBP13.96□□□□□ -0.17
C9orf3-202ENST00000297979 K7ESM1 405 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 MID1O15344 667 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SYNCRIPO60506 623 aaKnown RBP13.96□□□□□ -0.17
C9orf3-202ENST00000297979 TM7SF2O76062 418 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ADH1BP00325 375 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CD1EP15812 388 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ATP4BP51164 291 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 RAP1GDS1P52306 607 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 LETMD1Q6P1Q0 360 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 NLRP8Q86W28 1048 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CACUL1Q86Y37 369 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CDYL2Q8N8U2 506 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 ATP6V1E2Q96A05 226 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 TUBGCP3Q96CW5 907 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CDK15Q96Q40 435 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 SLC39A3Q9BRY0 314 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 CCM2Q9BSQ5 444 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 EPHX3Q9H6B9 360 aa13.96□□□□□ -0.17
C9orf3-202ENST00000297979 GFYI3L273 518 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 K7EPI3 171 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 HIST1H2AGP0C0S8 130 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-202ENST00000297979 HIST1H2ADP20671 130 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 CYP2A7P20853 494 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 TMEM220Q6QAJ8 160 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 SCUBE1Q8IWY4 988 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 TCAIMQ8N3R3 496 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 AADATQ8N5Z0 425 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 DCBLD1Q8N8Z6 715 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 EZH1Q92800 747 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-202ENST00000297979 HIST1H2AHQ96KK5 128 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 FAM161BQ96MY7 647 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 HIST1H2AJQ99878 128 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 H2AFJQ9BTM1 129 aa13.96□□□□□ -0.18
C9orf3-202ENST00000297979 DENND2DQ9H6A0 471 aaPredicted RBP13.96□□□□□ -0.18
C9orf3-202ENST00000297979 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.18
C9orf3-202ENST00000297979 TMEM202A6NGA9 273 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 LBPP18428 481 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 ITGAXP20702 1163 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 C5AR1P21730 350 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 GDF5P43026 501 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 CCNG1P51959 295 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 STX1BP61266 288 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 TRAF3Q13114 568 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 FASTKQ14296 549 aaKnown RBP13.95□□□□□ -0.18
C9orf3-202ENST00000297979 AAK1Q2M2I8 961 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 AGBL4Q5VU57 503 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 ULK2Q8IYT8 1036 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 OR4F6Q8NGB9 312 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 GLMNQ92990 594 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 TMEM159Q96B96 161 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 CCT7Q99832 543 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 PSMD12O00232 456 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-202ENST00000297979 AP1G1O43747 822 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 ALDOCP09972 364 aaKnown RBP13.95□□□□□ -0.18
C9orf3-202ENST00000297979 CTHP32929 405 aa13.95□□□□□ -0.18
C9orf3-202ENST00000297979 NUDT2P50583 147 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms