RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 NCANO14594 1321 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 RGPD1P0DJD0 1748 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 P2RX6O15547 441 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 HCRTR2O43614 444 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FARS2O95363 451 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TSPAN15O95858 294 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 MAOAP21397 527 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 DSG3P32926 999 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 HADHBP55084 474 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 CTDSPL2Q05D32 466 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 DDB1Q16531 1140 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 SPESP1Q6UW49 350 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 HIST2H3AQ71DI3 136 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 COX15Q7KZN9 410 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 APOBEC3FQ8IUX4 373 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 BPIFB1Q8TDL5 484 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 LENG9Q96B70 501 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 SMARCD1Q96GM5 515 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 COQ10AQ96MF6 247 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 OR14A2Q96R54 314 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 APBA2Q99767 749 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 AGXT2Q9BYV1 514 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 CHST12Q9NRB3 414 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 DNAJB9Q9UBS3 223 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TSR3Q9UJK0 312 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ABCA6Q8N139 1617 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TOGARAM1Q9Y4F4 1720 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 F8P00451 2351 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 PPEF1O14829 653 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 CD36P16671 472 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 NOS2P35228 1153 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TAF6P49848 677 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 RTP1P59025 263 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TXNL4AP83876 142 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 RAB31Q13636 194 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 DCAF4L1Q3SXM0 396 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 AARDQ4LEZ3 155 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ADGRF2Q8IZF7 708 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ESX1Q8N693 406 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 GALNT11Q8NCW6 608 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 OR52B2Q96RD2 323 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF670Q9BS34 389 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FUCA2Q9BTY2 467 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 SLC38A1Q9H2H9 487 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 MAN1C1Q9NR34 630 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TMEM248Q9NWD8 314 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 DISP2A7MBM2 1401 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 ANKRD33BA6NCL7 494 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 STK25O00506 426 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FKTNO75072 461 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TMEM127O75204 238 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 GCATO75600 419 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 C6orf222P0C671 652 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 SOX11P35716 441 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 TAGLN2P37802 199 aaKnown RBP4.78□□□□□ -1.64
CSMD3-201ENST00000297405 RFC3P40938 356 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 HNF4GQ14541 408 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FAM69AQ5T7M9 428 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 AWAT2Q6E213 333 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 GPRIN3Q6ZVF9 776 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FAM20CQ8IXL6 584 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 CBR4Q8N4T8 237 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 KLHDC1Q8N7A1 406 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 SLC7A13Q8TCU3 470 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 PANX1Q96RD7 426 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 MCMBPQ9BTE3 642 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 OR11A1Q9GZK7 315 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 MAF1Q9H063 256 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 FBXO44Q9H4M3 255 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 KCTD5Q9NXV2 234 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 HPSEQ9Y251 543 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 RALGAPA2Q2PPJ7 1873 aa4.78□□□□□ -1.64
CSMD3-201ENST00000297405 A8MXE2 369 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 LYPLA1O75608 230 aaPredicted RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 DNAJA1P31689 397 aaKnown RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 RPA3P35244 121 aaPredicted RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 PITPNBP48739 271 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 ST8SIA6P61647 398 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 RPS27AP62979 156 aaKnown RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 UBA52P62987 128 aaKnown RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 SLC17A1Q14916 467 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 C4orf17Q53FE4 359 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 ESCO2Q56NI9 601 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF746Q6NUN9 644 aaPredicted RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 COMMD2Q86X83 199 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 SCN4BQ8IWT1 228 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 SCGB1C1Q8TD33 95 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 DCAKDQ8WVC6 231 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 KCTD12Q96CX2 325 aaKnown RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 SULT4A1Q9BR01 284 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 IRX2Q9BZI1 471 aaPredicted RBP4.78□□□□□ -1.65
CSMD3-201ENST00000297405 PIGMQ9H3S5 423 aa4.78□□□□□ -1.65
CSMD3-201ENST00000297405 SLC25A12O75746 678 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ACO1P21399 889 aaKnown RBP4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ACTA2P62736 377 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 ACTG2P63267 376 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 CLVS2Q5SYC1 327 aa4.77□□□□□ -1.65
CSMD3-201ENST00000297405 RHOUQ7L0Q8 258 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms