RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF658BQ4V348 819 aaPredicted RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 TMEM220Q6QAJ8 160 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 KIF2BQ8N4N8 673 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 CPSF7Q8N684 471 aaKnown RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 GLMNQ92990 594 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ZNF382Q96SR6 550 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 TRIM39Q9HCM9 518 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 SLC5A10A0PJK1 596 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 IGLON5A6NGN9 336 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 GFYI3L273 518 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ATP6V1G1O75348 118 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ESRRBO95718 433 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ENO1P06733 434 aaKnown RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 GLULP15104 373 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 COL9A1P20849 921 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 FOXA1P55317 472 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 C18orf21Q32NC0 220 aaPredicted RBP15.23■□□□□ 0.03
LSM6-201ENST00000296581 CEP70Q8NHQ1 597 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 COX14Q96I36 57 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 TMEM79Q9BSE2 394 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 ZNF225Q9UK10 706 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 PDE10AQ9Y233 779 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 DNAJC15Q9Y5T4 150 aa15.23■□□□□ 0.03
LSM6-201ENST00000296581 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 TMEM202A6NGA9 273 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 RNASEH2AO75792 299 aaKnown RBP15.22■□□□□ 0.03
LSM6-201ENST00000296581 PCDH8O95206 1070 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 GUCA1CO95843 209 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 PKNOX1P55347 436 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 IER5LQ5T953 404 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 UBE2R2Q712K3 238 aaPredicted RBP15.22■□□□□ 0.03
LSM6-201ENST00000296581 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 PLA2G15Q8NCC3 412 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 EGFL8Q99944 293 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 NUSAP1Q9BXS6 441 aaKnown RBP15.22■□□□□ 0.03
LSM6-201ENST00000296581 PARVBQ9HBI1 364 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 MYO10Q9HD67 2058 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 SHISA7A6NL88 538 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 SLC22A2O15244 555 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 DCXO43602 365 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 VEGFDO43915 354 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 RPIAP49247 311 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 WSCD2Q2TBF2 565 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 PNCKQ6P2M8 343 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 GOLGA7Q7Z5G4 137 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 TMPRSS6Q8IU80 811 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 MSANTD3Q96H12 275 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 HIC2Q96JB3 615 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
LSM6-201ENST00000296581 LINC00615Q96LM1 132 aaPredicted RBP15.22■□□□□ 0.03
LSM6-201ENST00000296581 KCNA7Q96RP8 456 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 CD244Q9BZW8 370 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 OR2AG1Q9H205 316 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 FBXL12Q9NXK8 326 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 ATXN10Q9UBB4 475 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 STK38LQ9Y2H1 464 aa15.22■□□□□ 0.03
LSM6-201ENST00000296581 SPTBN5Q9NRC6 3674 aaKnown RBP15.21■□□□□ 0.03
LSM6-201ENST00000296581 PLRG1O43660 514 aaKnown RBP15.21■□□□□ 0.03
LSM6-201ENST00000296581 MATN4O95460 622 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 DNTTP04053 509 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 ANXA5P08758 320 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 TEAD1P28347 426 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 PRDX6P30041 224 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 PRDX3P30048 256 aaKnown RBP15.21■□□□□ 0.03
LSM6-201ENST00000296581 ADSLP30566 484 aaPredicted RBP15.21■□□□□ 0.03
LSM6-201ENST00000296581 HSPA7P48741 367 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 CDC16Q13042 620 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 KLF10Q13118 480 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 GTF2H2Q13888 395 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 RBBP7Q16576 425 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 FAM219BQ5XKK7 198 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 NXNQ6DKJ4 435 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 GTF2H2CQ6P1K8 395 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 TTC23LQ6PF05 361 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 GPRIN3Q6ZVF9 776 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 CHSY3Q70JA7 882 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 TWIST2Q8WVJ9 160 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 C19orf60Q96EN9 201 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 YIPF2Q9BWQ6 316 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 TRIM54Q9BYV2 358 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 WWOXQ9NZC7 414 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 SCML1Q9UN30 329 aa15.21■□□□□ 0.03
LSM6-201ENST00000296581 A8MUI8 341 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 ASGR2P07307 311 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GSTM1P09488 218 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GGT5P36269 586 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 POLE2P56282 527 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GSTM4Q03013 218 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 GTF2H3Q13889 308 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 SYTL3Q4VX76 610 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 TMEM198Q66K66 360 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 LARP4Q71RC2 724 aaKnown RBP eCLIP15.2■□□□□ 0.024e-6■□□□□ 9.4
LSM6-201ENST00000296581 EFL1Q7Z2Z2 1120 aaKnown RBP15.2■□□□□ 0.02
LSM6-201ENST00000296581 SLC22A15Q8IZD6 547 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 TCAIMQ8N3R3 496 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 TMEM159Q96B96 161 aa15.2■□□□□ 0.02
LSM6-201ENST00000296581 BTBD10Q9BSF8 475 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms