RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 WRAP53Q9BUR4 548 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 DUSP26Q9BV47 211 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 SMURF2Q9HAU4 748 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 WBP11Q9Y2W2 641 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 LOC110117498-PIK3R3F6TDL0 507 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 OR1F1O43749 312 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 KHDRBS3O75525 346 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CDH1P12830 882 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MAGEA11P43364 429 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MYBPC1Q00872 1141 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 HID1Q8IV36 788 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 DDX1Q92499 740 aaKnown RBP12.59□□□□□ -0.39
PTCD1-201ENST00000292478 C1GALT1C1Q96EU7 318 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 NPY6RQ99463 290 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 MYOCQ99972 504 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 LPIN3Q9BQK8 851 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 CHID1Q9BWS9 393 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 N6AMT1Q9Y5N5 214 aa12.59□□□□□ -0.39
PTCD1-201ENST00000292478 TNFRSF21O75509 655 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 NELFEP18615 380 aaKnown RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 PTPN5P54829 565 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 FAM174BQ3ZCQ3 159 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 BRAT1Q6PJG6 821 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 TTC29Q8NA56 475 aaPredicted RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 BCAS3Q9H6U6 928 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 A8MT66 165 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 PDPK1O15530 556 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 SSNA1O43805 119 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 GPX6P59796 221 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 FAM180AQ6UWF9 173 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 PARGQ86W56 976 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ZC3HC1Q86WB0 502 aaKnown RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 LCN9Q8WX39 176 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 BORCS6Q96GS4 357 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ABCB8Q9NUT2 735 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 YIPF1Q9Y548 306 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 HS3ST4Q9Y661 456 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 RIIAD1A6NNX1 92 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 SLC30A4O14863 429 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 F2P00734 622 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 NT5EP21589 574 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 CHRNA4P43681 627 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF155Q12901 538 aaPredicted RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 EIPR1Q53HC9 387 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 OVCA2Q8WZ82 227 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ZSCAN5AQ9BUG6 496 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 KIFC1Q9BW19 673 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 SCN2BO60939 215 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 CFHP08603 1231 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 OGDHQ02218 1023 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 GDPD4Q6W3E5 623 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 MBOAT1Q6ZNC8 495 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 OR13C4Q8NGS5 318 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 RNASE11Q8TAA1 199 aaKnown RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 EBF4Q9BQW3 602 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 POPDC3Q9HBV1 291 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 RASSF1Q9NS23 344 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 ING3Q9NXR8 418 aa12.58□□□□□ -0.4
PTCD1-201ENST00000292478 CNOT6Q9ULM6 557 aaKnown RBP12.58□□□□□ -0.4
PTCD1-201ENST00000292478 C10orf71Q711Q0 1435 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 WNT9AO14904 365 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 OR5F1O95221 314 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ANXA8P13928 327 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 IGFALSP35858 605 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 BCAP31P51572 246 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SERINC3Q13530 473 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PAQR3Q6TCH7 311 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 FAM131AQ6UXB0 335 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SAPCD2Q86UD0 394 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 P2RY8Q86VZ1 359 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 DNASE1L2Q92874 299 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SLC35G5Q96KT7 338 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF317Q96PQ6 595 aaPredicted RBP12.57□□□□□ -0.4
PTCD1-201ENST00000292478 EQTNQ9NQ60 294 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF30P17039 623 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ECT2LQ008S8 904 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 SLC10A7Q0GE19 358 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 OXR1Q8N573 874 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 TMEM248Q9NWD8 314 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 CXorf49A8MYA2 514 aaPredicted RBP12.57□□□□□ -0.4
PTCD1-201ENST00000292478 ECI2O75521 394 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 DHFRP00374 187 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 NFKB2Q00653 900 aa12.57□□□□□ -0.4
PTCD1-201ENST00000292478 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms