RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 NVLO15381 856 aaKnown RBP24.48■■□□□ 1.51
PDF-201ENST00000288022 SEPHS1P49903 392 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 PRKG2Q13237 762 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 CACHD1Q5VU97 1274 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 HIBCHQ6NVY1 386 aaPredicted RBP24.48■■□□□ 1.51
PDF-201ENST00000288022 C19orf48Q6RUI8 117 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 CILP2Q8IUL8 1156 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 PDIK1LQ8N165 341 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.48■■□□□ 1.51
PDF-201ENST00000288022 LPGAT1Q92604 370 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 TAAR9Q96RI9 348 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 RAB33BQ9H082 229 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 SRMSQ9H3Y6 488 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 EPHA6Q9UF33 1036 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 VPS9D1Q9Y2B5 631 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 KIF1CO43896 1103 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 SEC31AO94979 1220 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 ANKRD34CP0C6C1 535 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 ABCG1P45844 678 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 PPP1CAP62136 330 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 MSS51Q4VC12 460 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 CTSL3PQ5NE16 218 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 CENPUQ71F23 418 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 OR5AR1Q8NGP9 310 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 GSDMBQ8TAX9 411 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 EBNA1BP2Q99848 306 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 TRIT1Q9H3H1 467 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 INTS10Q9NVR2 710 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.47■■□□□ 1.51
PDF-201ENST00000288022 FOXJ2Q9P0K8 574 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 SNX24Q9Y343 169 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 FAM169AQ9Y6X4 670 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 APC2O95996 2303 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 EPG5Q9HCE0 2579 aa24.47■■□□□ 1.51
PDF-201ENST00000288022 FAM187AA6NFU0 413 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 B4E171 279 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 C9orf172C9J069 976 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 TOX3O15405 576 aaPredicted RBP24.46■■□□□ 1.51
PDF-201ENST00000288022 ITPKBP27987 946 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 AOAHP28039 575 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 ACADLP28330 430 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 TSPAN7P41732 249 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 ARL4CP56559 192 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 PRKAA1Q13131 559 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 CTBP1Q13363 440 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 CRYMQ14894 314 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 DNTTIP2Q5QJE6 756 aaKnown RBP24.46■■□□□ 1.51
PDF-201ENST00000288022 HP1BP3Q5SSJ5 553 aaPredicted RBP24.46■■□□□ 1.51
PDF-201ENST00000288022 OTOAQ7RTW8 1153 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 MAATS1Q7Z4T9 603 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 DENND6AQ8IWF6 608 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 SLC22A15Q8IZD6 547 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 OR52E1Q8NGJ3 308 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 CALML6Q8TD86 181 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 ZNF592Q92610 1267 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 TRIM44Q96DX7 344 aaPredicted RBP24.46■■□□□ 1.51
PDF-201ENST00000288022 PWWP2AQ96N64 755 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 BIRC8Q96P09 236 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 NAT9Q9BTE0 207 aa24.46■■□□□ 1.51
PDF-201ENST00000288022 TDRKHQ9Y2W6 561 aaKnown RBP24.46■■□□□ 1.51
PDF-201ENST00000288022 H3BMM5 538 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 NDC80O14777 642 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 KPNA5O15131 536 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 KLK10O43240 276 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 TTC4O95801 387 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 ESR1P03372 595 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 F7P08709 466 aaPredicted RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 POLR2CP19387 275 aaPredicted RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 RPL21P46778 160 aaKnown RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 HIF1AQ16665 826 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 SPANXN3Q5MJ09 141 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 PRSS42Q7Z5A4 293 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 KCNMB4Q86W47 210 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 VRK3Q8IV63 474 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 SPACA3Q8IXA5 215 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 LMNTD2Q8IXW0 634 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 FAM167BQ9BTA0 163 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 DPH5Q9H2P9 285 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 ZNF768Q9H5H4 540 aaKnown RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 TFB2MQ9H5Q4 396 aaKnown RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 FBXO6Q9NRD1 293 aaPredicted RBP24.45■■□□□ 1.5
PDF-201ENST00000288022 CDYLQ9Y232 598 aa24.45■■□□□ 1.5
PDF-201ENST00000288022 ACACAQ13085 2346 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 GSAPA4D1B5 854 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 RAD51CO43502 376 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 NIPSNAP2O75323 286 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 GPC4O75487 556 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 KRT37O76014 449 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 URI1O94763 535 aaPredicted RBP24.44■■□□□ 1.5
PDF-201ENST00000288022 S1PR4O95977 384 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CHRM3P20309 590 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 ELK3P41970 407 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 SLC1A2P43004 574 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 RAB15P59190 212 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 MC2RQ01718 297 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 CKAP4Q07065 602 aaKnown RBP24.44■■□□□ 1.5
PDF-201ENST00000288022 ABRQ12979 859 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 HSP90AA5PQ58FG0 334 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 ZNF789Q5FWF6 425 aa24.44■■□□□ 1.5
PDF-201ENST00000288022 DCAF12Q5T6F0 453 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms