RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 KCNS3Q9BQ31 491 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 C2orf49Q9BVC5 232 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 MKS1Q9NXB0 559 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 TBC1D30Q9Y2I9 924 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 STRCQ7RTU9 1775 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 UBE2QL1A1L167 161 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ECI2O75521 394 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 FUT4P22083 530 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 GDF5P43026 501 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 CD83Q01151 205 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 RHAGQ02094 409 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 TCEA2Q15560 299 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 NRAPQ86VF7 1730 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 CILP2Q8IUL8 1156 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 STK40Q8N2I9 435 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 DBF4BQ8NFT6 615 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 WDR48Q8TAF3 677 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC45A3Q96JT2 553 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 TRNT1Q96Q11 434 aaKnown RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF490Q9ULM2 529 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 HMX2A2RU54 273 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 INSIG1O15503 277 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ACSL4O60488 711 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 PPP2R1BP30154 601 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 STAT5AP42229 794 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 BCAP31P51572 246 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 YBEYP58557 167 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 IL18Q14116 193 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 GRB7Q14451 532 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF613Q6PF04 617 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 SYCE2Q6PIF2 218 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 DEPDC4Q8N2C3 294 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 PIK3C3Q8NEB9 887 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 TTPALQ9BTX7 342 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 POLR3BQ9NW08 1133 aaPredicted RBP12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 MALT1Q9UDY8 824 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 NUMBLQ9Y6R0 609 aa12.36□□□□□ -0.43
SLC6A1-201ENST00000287766 OR6C70A6NIJ9 312 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 BCAS2O75934 225 aaPredicted RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 IGSF6O95976 241 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ALPIP09923 528 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 IGFBP5P24593 272 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 NDST2P52849 883 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 UFM1P61960 85 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 IL10RBQ08334 325 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 MS4A13Q5J8X5 152 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 BICRALQ6AI39 1079 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 MEIOBQ8N635 442 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 SPPL2BQ8TCT7 592 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 WDR6Q9NNW5 1121 aaKnown RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ACTL7AQ9Y615 435 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 VARSP26640 1264 aaKnown RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC7A1P30825 629 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 TUBA1BP68363 451 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ERAP2Q6P179 960 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 TUBA1AQ71U36 451 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 TRMT11Q7Z4G4 463 aaKnown RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PPP3R2Q96LZ3 170 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 MED28Q9H204 178 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 KAT8Q9H7Z6 458 aaKnown RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 COMMD9Q9P000 198 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 CD84Q9UIB8 345 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 IQCMA0A1B0GVH7 501 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 A6NHS1 94 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 BBIP1A8MTZ0 92 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 A8MV72 311 aaPredicted RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 MAFKO60675 156 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ATF6P18850 670 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 SERPINA4P29622 427 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 OLR1P78380 273 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 FAM174BQ3ZCQ3 159 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 RGMBQ6NW40 437 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC2A7Q6PXP3 512 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 C2CD4AQ8NCU7 369 aaPredicted RBP12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ZMIZ2Q8NF64 920 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PYCR2Q96C36 320 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PANX1Q96RD7 426 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 C8orf4Q9NR00 106 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
SLC6A1-201ENST00000287766 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 ZC3H7AQ8IWR0 971 aaKnown RBP12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 LRRC58Q96CX6 371 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 SLC47A1Q96FL8 570 aa12.34□□□□□ -0.43
SLC6A1-201ENST00000287766 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms