RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CHAF1BQ13112 559 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SCGB2A2Q13296 93 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PARP15Q460N3 678 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 HSD17B12Q53GQ0 312 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SPATA31A3Q5VYP0 1347 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 RALGPS2Q86X27 583 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ABCA6Q8N139 1617 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 OXR1Q8N573 874 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF676Q8N7Q3 588 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 TWIST2Q8WVJ9 160 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CIB1Q99828 191 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 POLR2J3Q9H1A7 115 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 KCNN3Q9UGI6 736 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MADDQ8WXG6 1647 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 TM7SF2O76062 418 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SHBGP04278 402 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 APODP05090 189 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ANXA4P09525 319 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GSTT2P0CG29 244 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CTNNB1P35222 781 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PSMD8P48556 350 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 REP15Q6BDI9 236 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CREG2Q8IUH2 290 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SPPL2CQ8IUH8 684 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CHERPQ8IWX8 916 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GSTCDQ8NEC7 633 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ZBED6CLQ96FA7 236 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 HSPA12BQ96MM6 686 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 NRCAMQ92823 1304 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CAPN8A6NHC0 703 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 LRRC72A6NJI9 287 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ARPC2O15144 300 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SLC22A2O15244 555 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 BPGMP07738 259 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ALAS2P22557 587 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 HEPACAMQ14CZ8 416 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 DPY19L1Q2PZI1 675 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ZER1Q7Z7L7 766 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 FAM129CQ86XR2 697 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 LMLNQ96KR4 655 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 LRRC19Q9H756 370 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 KIAA1522Q9P206 1035 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SCP2D1Q9UJQ7 156 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MRPL42Q9Y6G3 142 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SETBP1Q9Y6X0 1596 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 HSPA12AO43301 675 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 HTR7P34969 479 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 XKP51811 444 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TPTEP56180 551 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MERTKQ12866 999 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 USP4Q13107 963 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 FOXRED2Q8IWF2 684 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 DPAGT1Q9H3H5 408 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MKKSQ9NPJ1 570 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PLLPQ9Y342 182 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF99A8MXY4 864 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 I3L521 148 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GNAZP19086 355 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 RYKP34925 604 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SLC5A3P53794 718 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CDK18Q07002 472 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MED27Q6P2C8 311 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 DCDC5Q6ZRR9 648 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PHC2Q8IXK0 858 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SPATA6LQ8N4H0 392 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ABHD16BQ9H3Z7 469 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SEC14L4Q9UDX3 406 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 MALT1Q9UDY8 824 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 PLA2R1Q13018 1463 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TSPAN8P19075 237 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 AHCYP23526 432 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 NRG1Q02297 640 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 HSPB3Q12988 150 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SIM2Q14190 667 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SEC23AQ15436 765 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CARTPTQ16568 116 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 BRMS1LQ5PSV4 323 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 HMBOX1Q6NT76 420 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 NPNTQ6UXI9 565 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF517Q6ZMY9 492 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ADGRD2Q7Z7M1 963 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SUN3Q8TAQ9 357 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CXorf21Q9HAI6 301 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 ASCC3Q8N3C0 2202 aaKnown RBP8.6□□□□□ -1.03
NIPBL-201ENST00000282516 C9IYK1 514 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 SLC7A1P30825 629 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 HCAR3P49019 387 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 LIMK2P53671 638 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GJA9P57773 515 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GNG2P59768 71 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 TIGD6Q17RP2 521 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 GLYATQ6IB77 296 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 LCN9Q8WX39 176 aa8.6□□□□□ -1.03
NIPBL-201ENST00000282516 CCDC120Q96HB5 630 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms