RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PCDHB9Q9Y5E1 797 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 A0A075B6Q4 140 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 C2orf71A6NGG8 1288 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 HLA-DPB1P04440 258 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC9A3P48764 834 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 RALGPS1Q5JS13 557 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 GARNL3Q5VVW2 1013 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 LCLAT1Q6UWP7 414 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC37A3Q8NCC5 494 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 OR10G2Q8NGC3 310 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 C12orf43Q96C57 262 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PIWIL1Q96J94 861 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 CD93Q9NPY3 652 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 CLDN4O14493 209 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 LYPLA2O95372 231 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 CRISP3P54108 245 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 CELF3Q5SZQ8 465 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ADGRA1Q86SQ6 560 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PHYKPLQ8IUZ5 450 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 OXR1Q8N573 874 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF781Q8N8C0 355 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ANKFN1Q8N957 763 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 OR2L2Q8NH16 312 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF558Q96NG5 402 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ADAM2Q99965 735 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ACP6Q9NPH0 428 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM5Q9Y2B1 443 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 FXYD6-FXYD2A0A087WZ82 144 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ILVBLA1L0T0 632 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PIP5K1BO14986 540 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PIRTP0C851 137 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SRCP12931 536 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 IDSP22304 550 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ACVR2AP27037 513 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 CMPK1P30085 196 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM126BQ8IUX1 230 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 NCSTNQ92542 709 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 NR4A3Q92570 626 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 FXYD6Q9H0Q3 95 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 UCKL1Q9NWZ5 548 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 MALT1Q9UDY8 824 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 MED31Q9Y3C7 131 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF451Q9Y4E5 1061 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 TSPOAP1O95153 1857 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PREX2Q70Z35 1606 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 TLR4O00206 839 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 EI24O14681 340 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 RGL2O15211 777 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 PAGE1O75459 146 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ESR1P03372 595 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 UBA1P22314 1058 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC1A2P43004 574 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 FKBP1AP62942 108 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ACSBG2Q5FVE4 666 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SYVN1Q86TM6 617 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 OR4K2Q8NGD2 314 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 JOSD2Q8TAC2 188 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF420Q8TAQ5 688 aaPredicted RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC16A10Q8TF71 515 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 C10orf82Q8WW14 230 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SMG7Q92540 1137 aaKnown RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC25A51Q9H1U9 297 aa8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 MKKSQ9NPJ1 570 aaPredicted RBP8.58□□□□□ -1.04
SCUBE3-201ENST00000274938 MTHFD1P11586 935 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF20P17024 532 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PRKCDQ05655 676 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 UBAP2Q5T6F2 1119 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CAND1Q86VP6 1230 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 XYLT1Q86Y38 959 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 MARCH9Q86YJ5 346 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CFAP206Q8IYR0 622 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GHDCQ8N2G8 530 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 UBE2J2Q8N2K1 259 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PLD5Q8N7P1 536 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 RASGEF1AQ8N9B8 481 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 EXOSC8Q96B26 276 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CCSER2Q9H7U1 834 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 POLLQ9UGP5 575 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SCAMP3O14828 347 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 HK1P19367 917 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 NT5EP21589 574 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CCNFP41002 786 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CDKN2BP42772 138 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 RPIAP49247 311 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 AFF1P51825 1210 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC18A1P54219 525 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CLEC6AQ6EIG7 209 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 NUP54Q7Z3B4 507 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 TIGD4Q8IY51 512 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 GPR135Q8IZ08 494 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 PNLDC1Q8NA58 520 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 STON2Q8WXE9 905 aa8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CCDC86Q9H6F5 360 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 CPSF4LA6NMK7 179 aaKnown RBP8.57□□□□□ -1.04
SCUBE3-201ENST00000274938 NCK1P16333 377 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms