RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GPR65Q8IYL9 337 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 VANGL1Q8TAA9 524 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TRNT1Q96Q11 434 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 KAT7O95251 611 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 LINGO3P0C6S8 592 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 KIAA1324Q6UXG2 1013 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 IPPKQ9H8X2 491 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TAS2R1Q9NYW7 299 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHB9Q9Y5E1 797 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SYN3O14994 580 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 IDSP22304 550 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CAPSQ13938 189 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ARMC10Q8N2F6 343 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TEX19Q8NA77 164 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CREB3L1Q96BA8 519 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MRPL45Q9BRJ2 306 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TPK1Q9H3S4 243 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ST6GALNAC4Q9H4F1 302 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 FNIP2Q9P278 1114 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 A8MUI8 341 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PPEF2O14830 753 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SLC35G6P0C7Q6 338 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 QPCTQ16769 361 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PITRM1Q5JRX3 1037 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SLC30A6Q6NXT4 461 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MSANTD2Q6P1R3 559 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PIGKQ92643 395 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 NXPE2Q96DL1 559 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 TM6SF2Q9BZW4 377 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 HIPK3Q9H422 1215 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 C1orf109Q9NX04 203 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ZIM2Q9NZV7 527 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 RUVBL1Q9Y265 456 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 APODP05090 189 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SPIN4Q56A73 249 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 VGLL2Q8N8G2 317 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ANKFN1Q8N957 763 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MFSD1Q9H3U5 465 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ABCB9Q9NP78 766 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 BCL9LQ86UU0 1499 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 DNTTP04053 509 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF20P17024 532 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ATP5A1P25705 553 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 MAZP56270 477 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CERCAMQ5T4B2 595 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 FAM43BQ6ZT52 329 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ZBTB8BQ8NAP8 495 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CHST4Q8NCG5 386 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ASB9Q96DX5 294 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 KLHL5Q96PQ7 755 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 GPR21Q99679 349 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CNTN6Q9UQ52 1028 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHGB6Q9Y5F9 930 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 NID2Q14112 1375 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 A0A1W2PPM1 405 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 FABP12A6NFH5 140 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 NUAK1O60285 661 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PET100P0DJ07 73 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 AQP1P29972 269 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PBX3P40426 434 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 CCNHP51946 323 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SLC5A3P53794 718 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 PHC1P78364 1004 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 FSTL4Q6MZW2 842 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 USP50Q70EL3 339 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 SATL1Q86VE3 508 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 FSTL5Q8N475 847 aaPredicted RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 AVL9Q8NBF6 648 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 NSMCE3Q96MG7 304 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 GFM1Q96RP9 751 aaKnown RBP7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ABI3Q9P2A4 366 aa7.86□□□□□ -1.15
LIMD1-201ENST00000273317 ATP6AP2A0A1C7CYW4 349 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 H3BM21 787 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 TULP2O00295 520 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 CLPXO76031 633 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 DNAJA1P31689 397 aaKnown RBP7.85□□□□□ -1.15
LIMD1-201ENST00000273317 GLUD2P49448 558 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 RFTN1Q14699 578 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-201ENST00000273317 HEPACAMQ14CZ8 416 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 TIGD6Q17RP2 521 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 VWA5B1Q5TIE3 1220 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 GRHL2Q6ISB3 625 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 GALNT15Q8N3T1 639 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 OR2L3Q8NG85 312 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 SLC13A3Q8WWT9 602 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 METTL21AQ8WXB1 218 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 NCSTNQ92542 709 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 KCNS3Q9BQ31 491 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 ALPPP05187 535 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 SLC2A2P11168 524 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-201ENST00000273317 COL6A1P12109 1028 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 ANXA8P13928 327 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 TSPAN8P19075 237 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 BMP6P22004 513 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 MAPK3P27361 379 aaPredicted RBP7.85□□□□□ -1.15
LIMD1-201ENST00000273317 CYP4F8P98187 520 aa7.85□□□□□ -1.15
LIMD1-201ENST00000273317 TUSC3Q13454 348 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms