RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PREPP48147 710 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 HNMTP50135 292 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 RASSF2P50749 326 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 CCR3P51677 355 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 PLOD1Q02809 727 aaPredicted RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 SFSWAPQ12872 951 aaKnown RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 GTF2H2Q13888 395 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 IRF4Q15306 451 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 GPR153Q6NV75 609 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 GTF2H2CQ6P1K8 395 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 MBOAT1Q6ZNC8 495 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 CHSY3Q70JA7 882 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 Q7L0L9 218 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 ZNF687Q8N1G0 1237 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 MCOLN3Q8TDD5 553 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 SKA2Q8WVK7 121 aaPredicted RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 PPM1EQ8WY54 764 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 GUCD1Q96NT3 240 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 ARL15Q9NXU5 204 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 GPR89AB7ZAQ6 455 aa16■□□□□ 0.15
TPM1-201ENST00000267996 SLC22A2O15244 555 aa16■□□□□ 0.15
TPM1-201ENST00000267996 POP7O75817 140 aaKnown RBP16■□□□□ 0.15
TPM1-201ENST00000267996 GPR89BP0CG08 455 aa16■□□□□ 0.15
TPM1-201ENST00000267996 UROSP10746 265 aa16■□□□□ 0.15
TPM1-201ENST00000267996 FOSL2P15408 326 aa16■□□□□ 0.15
TPM1-201ENST00000267996 NDUFV2P19404 249 aa16■□□□□ 0.15
TPM1-201ENST00000267996 ADSLP30566 484 aaPredicted RBP16■□□□□ 0.15
TPM1-201ENST00000267996 ERVPABLB-1P60509 514 aa16■□□□□ 0.15
TPM1-201ENST00000267996 SGCGQ13326 291 aa16■□□□□ 0.15
TPM1-201ENST00000267996 INPP5AQ14642 412 aa16■□□□□ 0.15
TPM1-201ENST00000267996 MLF2Q15773 248 aaPredicted RBP16■□□□□ 0.15
TPM1-201ENST00000267996 RBBP7Q16576 425 aa16■□□□□ 0.15
TPM1-201ENST00000267996 ZXDCQ2QGD7 858 aaPredicted RBP16■□□□□ 0.15
TPM1-201ENST00000267996 FAM219BQ5XKK7 198 aa16■□□□□ 0.15
TPM1-201ENST00000267996 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.159e-10■□□□□ 8.2
TPM1-201ENST00000267996 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
TPM1-201ENST00000267996 CHCHD4Q8N4Q1 142 aa16■□□□□ 0.15
TPM1-201ENST00000267996 TEX9Q8N6V9 391 aa16■□□□□ 0.15
TPM1-201ENST00000267996 OR52B6Q8NGF0 335 aa16■□□□□ 0.15
TPM1-201ENST00000267996 OR2L2Q8NH16 312 aa16■□□□□ 0.15
TPM1-201ENST00000267996 TWIST2Q8WVJ9 160 aa16■□□□□ 0.15
TPM1-201ENST00000267996 C19orf60Q96EN9 201 aa16■□□□□ 0.15
TPM1-201ENST00000267996 KCNA7Q96RP8 456 aa16■□□□□ 0.15
TPM1-201ENST00000267996 LGR4Q9BXB1 951 aa16■□□□□ 0.15
TPM1-201ENST00000267996 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
TPM1-201ENST00000267996 TUBB1Q9H4B7 451 aa16■□□□□ 0.15
TPM1-201ENST00000267996 KLC4Q9NSK0 619 aa16■□□□□ 0.15
TPM1-201ENST00000267996 OPTCQ9UBM4 332 aa16■□□□□ 0.15
TPM1-201ENST00000267996 TAGLN3Q9UI15 199 aa16■□□□□ 0.15
TPM1-201ENST00000267996 DUSP12Q9UNI6 340 aa16■□□□□ 0.15
TPM1-201ENST00000267996 NCKAP1Q9Y2A7 1128 aa16■□□□□ 0.15
TPM1-201ENST00000267996 TMEM98Q9Y2Y6 226 aa16■□□□□ 0.15
TPM1-201ENST00000267996 DNMT3AQ9Y6K1 912 aaPredicted RBP16■□□□□ 0.15
TPM1-201ENST00000267996 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
TPM1-201ENST00000267996 PRUNE2Q8WUY3 3088 aa16■□□□□ 0.15
TPM1-201ENST00000267996 MGAT4DA6NG13 374 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 ARHGEF33A8MVX0 844 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 DCXO43602 365 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 STK16O75716 305 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 ENO1P06733 434 aaKnown RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 HIST1H2AGP0C0S8 130 aaPredicted RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 ESRRAP11474 423 aaPredicted RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 HIST1H2ADP20671 130 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 CD72P21854 359 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PTPN4P29074 926 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PDHA2P29803 388 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PBLDP30039 288 aaPredicted RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 SLC6A12P48065 614 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 ABRQ12979 859 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 TRAF3Q13114 568 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 KLF10Q13118 480 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PUS10Q3MIT2 529 aaKnown RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 LETMD1Q6P1Q0 360 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 CFAP206Q8IYR0 622 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 FBXO15Q8NCQ5 510 aaPredicted RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 HM13Q8TCT9 377 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 FBXL8Q96CD0 374 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 HIST1H2AHQ96KK5 128 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 C3orf30Q96M34 536 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 HIST1H2AJQ99878 128 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 H2AFJQ9BTM1 129 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 C1QTNF7Q9BXJ2 289 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 WDR26Q9H7D7 661 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PCYT1BQ9Y5K3 369 aaPredicted RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 H3BM21 787 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 GIPC1O14908 333 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PIP5K1BO14986 540 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 OR4F21O95013 312 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 OTCP00480 354 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 NQO1P15559 274 aaKnown RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 GABRG2P18507 467 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PRDX6P30041 224 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 GDF5P43026 501 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 PIK3CGP48736 1102 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 NAA25Q14CX7 972 aa15.99■□□□□ 0.15
TPM1-201ENST00000267996 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.99■□□□□ 0.15
TPM1-201ENST00000267996 TMEM198Q66K66 360 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms