RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ZW10O43264 779 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TNNI3P19429 210 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 MLLT6P55198 1093 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CDH12P55289 794 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CD83Q01151 205 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SOX4Q06945 474 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 PIGGQ5H8A4 983 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 GAB3Q8WWW8 586 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 BRI3BPQ8WY22 251 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CYP2S1Q96SQ9 504 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CGREF1Q99674 301 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 KIFC1Q9BW19 673 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 C20orf27Q9GZN8 174 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF224Q9NZL3 707 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 ENPP3O14638 875 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SLC6A2P23975 617 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CORO1AP31146 461 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SNRPD1P62314 119 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 IRF2BPLQ9H1B7 796 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 RPF2Q9H7B2 306 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 ZFYVE1Q9HBF4 777 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TMLHEQ9NVH6 421 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 MARF1Q9Y4F3 1742 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 A0A1W2PQ67 120 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 GABRDO14764 452 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 ACSL4O60488 711 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 EFCAB14O75071 495 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 BMP10O95393 424 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CYP11A1P05108 521 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 RPLP0P05388 317 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CLTBP09497 229 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 EEFSECP57772 596 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 POLR2LP62875 67 aaKnown RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TNFAIP8L3Q5GJ75 292 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 CDC73Q6P1J9 531 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 DOK6Q6PKX4 331 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM126BQ8IUX1 230 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 OR5K1Q8NHB7 308 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 VANGL1Q8TAA9 524 aaPredicted RBP11.37□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM174Q8WUU8 243 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 EBPLQ9BY08 206 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 SPEF1Q9Y4P9 236 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 KCTD3Q9Y597 815 aa11.37□□□□□ -0.59
VPS33A-201ENST00000267199 LOC100130705A0A1B0GUX0 176 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SULT2A1Q06520 285 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 STX4Q12846 297 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 PABPC1LQ4VXU2 614 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 C10orf53Q8N6V4 93 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ART5Q96L15 291 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 Q96MT0 163 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TTPALQ9BTX7 342 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ATG10Q9H0Y0 220 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CMTM6Q9NX76 183 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 EVLQ9UI08 416 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 FAM234BA2RU67 622 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 FPGTO14772 594 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 INSIG1O15503 277 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SNAI1O95863 264 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CKBP12277 381 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ALDH3A2P51648 485 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ERVK-8P63133 956 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 KCNAB2Q13303 367 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ACOX1Q15067 660 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 POM121L1PQ3SYA9 428 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 FBXL22Q6P050 247 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM135Q86UB9 458 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 HJURPQ8NCD3 748 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 MYO19Q96H55 970 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TCF25Q9BQ70 676 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 MAGEH1Q9H213 219 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 OSGEPL1Q9H4B0 414 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 HS3ST4Q9Y661 456 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ZFP37Q9Y6Q3 630 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TSPAN4O14817 238 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 AREL1O15033 823 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 NIPSNAP2O75323 286 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 STK16O75716 305 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 F2P00734 622 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 TRBC1P01850 177 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ITGA2P17301 1181 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ITIH1P19827 911 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 GTF2E2P29084 291 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 MAPK8P45983 427 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ACADVLP49748 655 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 CCL23P55773 120 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 RPS24P62847 133 aaKnown RBP11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SMARCB1Q12824 385 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 NFATC3Q12968 1075 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 SPRYD7Q5W111 196 aa11.36□□□□□ -0.59
VPS33A-201ENST00000267199 ERAP2Q6P179 960 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms