RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TUBB2AQ13885 445 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 DUS1LQ6P1R4 473 aaKnown RBP9.47□□□□□ -0.89
VPS41-201ENST00000265745 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 MICALCLQ6ZW33 695 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 SERPINA9Q86WD7 417 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 OOSP2Q86WS3 158 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 PTRH1Q86Y79 214 aaKnown RBP9.47□□□□□ -0.89
VPS41-201ENST00000265745 PIANPQ8IYJ0 282 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 CARFQ8N187 725 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 OR4E2Q8NGC2 313 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 HM13Q8TCT9 377 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 LRRC45Q96CN5 670 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 PPM1MQ96MI6 270 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 DESI2Q9BSY9 194 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 TMEM121Q9BTD3 319 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 TUBB2BQ9BVA1 445 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 TRIM4Q9C037 500 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 OR52A5Q9H2C5 316 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 CLMPQ9H6B4 373 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 LRRC40Q9H9A6 602 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 AKIRIN1Q9H9L7 192 aaPredicted RBP9.47□□□□□ -0.89
VPS41-201ENST00000265745 LHX9Q9NQ69 397 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 NLE1Q9NVX2 485 aaPredicted RBP9.47□□□□□ -0.89
VPS41-201ENST00000265745 KCND3Q9UK17 655 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 PCDHGA6Q9Y5G7 932 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 HEBP2Q9Y5Z4 205 aa9.47□□□□□ -0.89
VPS41-201ENST00000265745 ASH1LQ9NR48 2969 aaKnown RBP9.47□□□□□ -0.89
VPS41-201ENST00000265745 MROH6A6NGR9 719 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 C21orf140B9A014 251 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 PSMD3O43242 534 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ICMTO60725 284 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 KATNA1O75449 491 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ZBTB11O95625 1053 aaPredicted RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 AP2A1O95782 977 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 NTRK1P04629 796 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 FURINP09958 794 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 PRSS56P0CW18 603 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 POLR2CP19387 275 aaPredicted RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 ACRV1P26436 265 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 PDHA2P29803 388 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 STIP1P31948 543 aaKnown RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 CD151P48509 253 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 KPNA2P52292 529 aaKnown RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 CACNG1Q06432 222 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 RPA4Q13156 261 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ERV3-1Q14264 604 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 KRT33BQ14525 404 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 POU6F1Q14863 301 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 P3H1Q32P28 736 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ZRANB3Q5FWF4 1079 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ARMC6Q6NXE6 501 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 TAS2R42Q7RTR8 314 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 TXLNBQ8N3L3 684 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 CLDN19Q8N6F1 224 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ACVR1CQ8NER5 493 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 OR8K5Q8NH50 307 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 C9orf43Q8TAL5 461 aaPredicted RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 CT55Q8WUE5 264 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 STYXQ8WUJ0 223 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 LCN9Q8WX39 176 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ABHD17AQ96GS6 310 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 GPR87Q9BY21 358 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 SRMSQ9H3Y6 488 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 COG4Q9H9E3 785 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 VPS37BQ9H9H4 285 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 ZNF71Q9NQZ8 489 aaPredicted RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 KCND1Q9NSA2 647 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 PIH1D1Q9NWS0 290 aaKnown RBP9.46□□□□□ -0.9
VPS41-201ENST00000265745 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 BTRCQ9Y297 605 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
VPS41-201ENST00000265745 SETXQ7Z333 2677 aaKnown RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 PIPSLA2A3N6 862 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 ANKRD33BA6NCL7 494 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 SLC9B1P1A6NJY1 282 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 IFRD1O00458 451 aaPredicted RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 BTN3A3O00478 584 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 CREG1O75629 220 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 AP2A2O94973 939 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 GSTM1P09488 218 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 SCTRP47872 440 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 ARCN1P48444 511 aaKnown RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 GSTM4Q03013 218 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 PRKAA1Q13131 559 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 DNASE1L3Q13609 305 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 SEPT6Q14141 434 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 GPR19Q15760 415 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 DBN1Q16643 649 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 SKIDA1Q1XH10 827 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 FAM199XQ6PEV8 388 aaPredicted RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 ZNF517Q6ZMY9 492 aaPredicted RBP9.45□□□□□ -0.9
VPS41-201ENST00000265745 LINC00523Q86TU6 105 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 TMEM135Q86UB9 458 aa9.45□□□□□ -0.9
VPS41-201ENST00000265745 TAB3Q8N5C8 712 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms