RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 NAE1Q13564 534 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 MEP1AQ16819 746 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 EGFLAMQ63HQ2 1017 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 ZNF549Q6P9A3 640 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 TAS1R1Q7RTX1 841 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 MRPL10Q7Z7H8 261 aaKnown RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 ERI1Q8IV48 349 aaKnown RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 CYB5D2Q8WUJ1 264 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 SAMHD1Q9Y3Z3 626 aaKnown RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 ELOVL7A1L3X0 281 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 COL6A1P12109 1028 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 KIAA1191Q96A73 305 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 LRRC3Q9BY71 257 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 FAM83DQ9H4H8 585 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 PCDH10Q9P2E7 1040 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 SNX6Q9UNH7 406 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 TSC22D4Q9Y3Q8 395 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 SQORQ9Y6N5 450 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 PRSS51A0A1B0GVH4 220 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 FADS2O95864 444 aaKnown RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 SLC6A2P23975 617 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 PTGER3P43115 390 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 AP1S1P61966 158 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 RFTN1Q14699 578 aaPredicted RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 SPANXN4Q5MJ08 99 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 GPR180Q86V85 440 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 ZBTB2Q8N680 514 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 CGREF1Q99674 301 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 KATNBL1Q9H079 304 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 TRNAU1APQ9NX07 287 aaKnown RBP19.49■□□□□ 0.71
CSPG5-201ENST00000264723 TTC3P53804 2025 aa19.49■□□□□ 0.71
CSPG5-201ENST00000264723 M0QZQ0 153 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 DFNA5O60443 496 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 NADKO95544 446 aaPredicted RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ESR1P03372 595 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SLC5A2P31639 672 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 MAGEA11P43364 429 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SEMA3BQ13214 749 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SGCGQ13326 291 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 TGFBIQ15582 683 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 CHRNA6Q15825 494 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 CCDC85BQ15834 202 aaPredicted RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 KDELC1Q6UW63 502 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 REXO5Q96IC2 774 aaKnown RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ZCCHC2Q9C0B9 1178 aaKnown RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ABCB10Q9NRK6 738 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ASF1AQ9Y294 204 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 GRM6O15303 877 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 FFAR2O15552 330 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 OGNP20774 298 aaKnown RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 MBOAT1Q6ZNC8 495 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 HID1Q8IV36 788 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 HS3ST5Q8IZT8 346 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 OR52J3Q8NH60 311 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SLC13A3Q8WWT9 602 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 TREX1Q9NSU2 369 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 CCM2LQ9NUG4 571 aaPredicted RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 VPS51Q9UID3 782 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 PCNTO95613 3336 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ADAM12O43184 909 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 DBTP11182 482 aaKnown RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 MCCD1P59942 119 aaPredicted RBP19.48■□□□□ 0.71
CSPG5-201ENST00000264723 MADCAM1Q13477 382 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 HEATR4Q86WZ0 1026 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 PROSER1Q86XN7 944 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 PIANPQ8IYJ0 282 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 ISOC1Q96CN7 298 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 PCDHB1Q9Y5F3 818 aa19.48■□□□□ 0.71
CSPG5-201ENST00000264723 SERPINB1P30740 379 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 FMO3P31513 532 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 STK19P49842 368 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 GALNT10Q86SR1 603 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 KLHDC9Q8NEP7 349 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 C2orf15Q8WU43 125 aaKnown RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 AP2M1Q96CW1 435 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 ZNF696Q9H7X3 374 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 ZNF840PA6NDX5 716 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 SLC9A3R1O14745 358 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 RGS21Q2M5E4 152 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 CCNYL2Q5T2Q4 361 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 PSMA8Q8TAA3 256 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 PGAP3Q96FM1 320 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 RANBP9Q96S59 729 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 DPP7Q9UHL4 492 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 RBMX2Q9Y388 322 aaKnown RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 SERPINA1P01009 418 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 CDK9P50750 372 aaKnown RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 UBE3AQ05086 875 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 ZBED5Q49AG3 693 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 TMEM207Q6UWW9 146 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 C1orf74Q96LT6 269 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 SMAD5Q99717 465 aaKnown RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 THG1LQ9NWX6 298 aaKnown RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 INSL5Q9Y5Q6 135 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 WNT6Q9Y6F9 365 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
CSPG5-201ENST00000264723 SSC5DA1L4H1 1573 aa19.47■□□□□ 0.71
CSPG5-201ENST00000264723 ACOT8O14734 319 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms