RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RARRES3Q9UL19 164 aa15.64■□□□□ 0.09
USE1-201ENST00000263897 TCAF1Q9Y4C2 921 aa15.64■□□□□ 0.09
USE1-201ENST00000263897 RPS6KL1Q9Y6S9 549 aa15.64■□□□□ 0.09
USE1-201ENST00000263897 SPTBP11277 2137 aa15.64■□□□□ 0.09
USE1-201ENST00000263897 MATN2O00339 956 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 NKX2-8O15522 239 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 OR1I1O60431 355 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 ZBTB11O95625 1053 aaPredicted RBP15.63■□□□□ 0.09
USE1-201ENST00000263897 FTH1P02794 183 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 OR56A5P0C7T3 313 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 EBLN1P0CF75 366 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 ARCN1P48444 511 aaKnown RBP15.63■□□□□ 0.09
USE1-201ENST00000263897 NPY2RP49146 381 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 PRKAA1Q13131 559 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 TUBB3Q13509 450 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 BOP1Q14137 746 aaKnown RBP15.63■□□□□ 0.09
USE1-201ENST00000263897 AFTPHQ6ULP2 937 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 ZNF534Q76KX8 674 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 RNF31Q96EP0 1072 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 PPM1MQ96MI6 270 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 CHRAC1Q9NRG0 131 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 SEC16AO15027 2179 aa15.63■□□□□ 0.09
USE1-201ENST00000263897 SLC5A10A0PJK1 596 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 B8ZZF3 427 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 BTN3A3O00478 584 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 TIAF1O95411 115 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 MT-ND3P03897 115 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 FAM87AP0C7U9 286 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 CCNYL3P0C7X3 344 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 SFTPCP11686 197 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 F8A1P23610 371 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 ACADLP28330 430 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PPARGP37231 505 aaPredicted RBP15.62■□□□□ 0.09
USE1-201ENST00000263897 SESN2P58004 480 aaPredicted RBP15.62■□□□□ 0.09
USE1-201ENST00000263897 PRAMEP78395 509 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PLOD1Q02809 727 aaPredicted RBP15.62■□□□□ 0.09
USE1-201ENST00000263897 PRKG2Q13237 762 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 BRD3Q15059 726 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 FASTKD1Q53R41 847 aaKnown RBP15.62■□□□□ 0.09
USE1-201ENST00000263897 TMTC4Q5T4D3 741 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PWWP2BQ6NUJ5 590 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 FBXO38Q6PIJ6 1188 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PRELID2Q8N945 189 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PPHLN1Q8NEY8 458 aaKnown RBP15.62■□□□□ 0.09
USE1-201ENST00000263897 OR52E1Q8NGJ3 308 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 ELMO1Q92556 727 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 STAMBPL1Q96FJ0 436 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 CATSPER2Q96P56 530 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 NRTNQ99748 197 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 C1GALT1Q9NS00 363 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 LNPEPQ9UIQ6 1025 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 POMT2Q9UKY4 750 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 PADI1Q9ULC6 663 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 BTRCQ9Y297 605 aa15.62■□□□□ 0.09
USE1-201ENST00000263897 SLC9B1P1A6NJY1 282 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 BHMG1C9JSJ3 638 aaPredicted RBP15.61■□□□□ 0.09
USE1-201ENST00000263897 F8W8V4 182 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 AP3B1O00203 1094 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 ITGB6P18564 788 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 CDH3P22223 829 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 PRDX3P30048 256 aaKnown RBP15.61■□□□□ 0.09
USE1-201ENST00000263897 TUBB4BP68371 445 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 BASP1P80723 227 aaKnown RBP15.61■□□□□ 0.09
USE1-201ENST00000263897 CDK16Q00536 496 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 MC1RQ01726 317 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 TUBB2AQ13885 445 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 SEMA3AQ14563 771 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 CRTC2Q53ET0 693 aaPredicted RBP15.61■□□□□ 0.09
USE1-201ENST00000263897 BORAQ6PGQ7 559 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 AMIGO1Q86WK6 493 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 TUBB2BQ9BVA1 445 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 KCND1Q9NSA2 647 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 BFARQ9NZS9 450 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 ANAPC5Q9UJX4 755 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 JRKLQ9Y4A0 524 aa15.61■□□□□ 0.09
USE1-201ENST00000263897 GSAPA4D1B5 854 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 BTN3A1O00481 513 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 TERTO14746 1132 aaKnown RBP15.6■□□□□ 0.09
USE1-201ENST00000263897 TCN2P20062 427 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 DLSTP36957 453 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 CRADDP78560 199 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 GPR19Q15760 415 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 NAPRTQ6XQN6 538 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 TBC1D21Q8IYX1 336 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 ADGRF3Q8IZF5 1079 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 OR5AR1Q8NGP9 310 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 OR8K5Q8NH50 307 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 STARD8Q92502 1023 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 ZNF501Q96CX3 271 aaPredicted RBP15.6■□□□□ 0.09
USE1-201ENST00000263897 PBKQ96KB5 322 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 HGH1Q9BTY7 390 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 CARD6Q9BX69 1037 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 XKR8Q9H6D3 395 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 LHX9Q9NQ69 397 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 TREX1Q9NSU2 369 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 CATSPERZQ9NTU4 200 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 GEMIN8Q9NWZ8 242 aaKnown RBP15.6■□□□□ 0.09
USE1-201ENST00000263897 POLG2Q9UHN1 485 aa15.6■□□□□ 0.09
USE1-201ENST00000263897 CROTQ9UKG9 612 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms