RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 NR6A1Q15406 480 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 AGAP6Q5VW22 663 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 DESI1Q6ICB0 168 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 GPSM1Q86YR5 675 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 UMODL1-AS1Q8N2C9 162 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 CDYL2Q8N8U2 506 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 METTL6Q8TCB7 284 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 BRSK1Q8TDC3 778 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 AGAP4Q96P64 663 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 AGO3Q9H9G7 860 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 ABCC13Q9NSE7 274 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 VAPAQ9P0L0 249 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 UXTQ9UBK9 157 aaPredicted RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF225Q9UK10 706 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PEX16Q9Y5Y5 336 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 UBA6A0AVT1 1052 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PEX11BO96011 259 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 EFNA1P20827 205 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 DGKQP52824 942 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 DSC2Q02487 901 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 AP5B1Q2VPB7 878 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TPRG1LQ5T0D9 272 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 IL27RAQ6UWB1 636 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 VASH1Q7L8A9 365 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 ABI1Q8IZP0 508 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TADA1Q96BN2 335 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 GAD1Q99259 594 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 OSMRQ99650 979 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 SP110Q9HB58 689 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 CD274Q9NZQ7 290 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 MYLKQ15746 1914 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PDZK1P1A8MUH7 402 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 LOC110117498-PIK3R3F6TDL0 507 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 ANKRD28O15084 1053 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 NDUFB5O43674 189 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 NDUFS3O75489 264 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 EPOP01588 193 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 MMP2P08253 660 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 ATXN1LP0C7T5 689 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 DPEP1P16444 411 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 FSHRP23945 695 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 NKX2-5P52952 324 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PROX2Q3B8N5 592 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 CCBE1Q6UXH8 406 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 DET1Q7L5Y6 550 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 TEX26Q8N6G2 289 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PIK3R3Q92569 461 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 GTF2H4Q92759 462 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 C1orf74Q96LT6 269 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 NDFIP2Q9NV92 336 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PNMA8BQ9ULN7 279 aaPredicted RBP12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 PKP3Q9Y446 797 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 KCTD3Q9Y597 815 aa12.17□□□□□ -0.46
CHMP2B-201ENST00000263780 CDC7O00311 574 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 VPS26AO75436 327 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ZBTB7AO95365 584 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 PFKLP17858 780 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ALOX12P18054 663 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 TGFBR2P37173 567 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 BAG6P46379 1132 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 AGTR2P50052 363 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 MAXP61244 160 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 SIM2Q14190 667 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CARTPTQ16568 116 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CPZQ66K79 652 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ANKRD34AQ69YU3 496 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 MSANTD2Q6P1R3 559 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CTU1Q7Z7A3 348 aaKnown RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 DPP9Q86TI2 863 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 CARNMT1Q8N4J0 409 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 OR7G1Q8NGA0 311 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 BLOC1S5Q8TDH9 187 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ACTL8Q9H568 366 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ANGPTL3Q9Y5C1 460 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NPEPPSL1A6NEC2 478 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NOTOA8MTQ0 251 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 E2F3O00716 465 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 ZW10O43264 779 aa12.16□□□□□ -0.46
CHMP2B-201ENST00000263780 SCO2O43819 266 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms