RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CLCNKAP51800 687 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 ATP6V0D1P61421 351 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 SIM2Q14190 667 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 PTK2BQ14289 1009 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CCSMST1Q4G0I0 132 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 METRNLQ641Q3 311 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 SLC30A9Q6PML9 568 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 SBSNQ6UWP8 590 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 PRR23BQ6ZRT6 265 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 ZCCHC23Q6ZST2 131 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 UBE2R2Q712K3 238 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 MTERF4Q7Z6M4 381 aaKnown RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 NRROSQ86YC3 692 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 GPSM1Q86YR5 675 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 SFTPA2Q8IWL1 248 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CNPY4Q8N129 248 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 LMNTD1Q8N9Z9 388 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 DYDC1Q8WWB3 177 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 PIGKQ92643 395 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 GLMNQ92990 594 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 PHF21BQ96EK2 531 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM126AQ9BYI3 521 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 OR52A5Q9H2C5 316 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF395Q9H8N7 513 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 RMI1Q9H9A7 625 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 DNAJC28Q9NX36 388 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 SCHIP1Q9P0W5 487 aaPredicted RBP9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 COPG2Q9UBF2 871 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CACNA1EQ15878 2313 aa9.52□□□□□ -0.89
SNRNP40-201ENST00000263694 CABIN1Q9Y6J0 2220 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 CUL9Q8IWT3 2517 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PRAMEF33A0A0G2JMD5 474 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PRR19A6NJB7 356 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 SUPT3HB4E1H0 165 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 TOR1BO14657 336 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 SUPT3HO75486 399 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 MATN4O95460 622 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 TNFP01375 233 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 MPC1LP0DKB6 136 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 MYL2P10916 166 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ENO3P13929 434 aaPredicted RBP9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 JUNDP17535 347 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 CCR10P46092 362 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 CBX1P83916 185 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 BNC1Q01954 994 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 CLCA4Q14CN2 919 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PPP1R3AQ16821 1122 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PFKFB4Q16877 469 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ZNF528Q3MIS6 628 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 DUS1LQ6P1R4 473 aaKnown RBP9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ZYG11AQ6WRX3 759 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 LCA5Q86VQ0 697 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 NUDCD3Q8IVD9 361 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PHACTR4Q8IZ21 702 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ZBTB44Q8NCP5 570 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 STAG3L4Q8TBR4 150 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ASB11Q8WXH4 323 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ESAMQ96AP7 390 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 RMDN2Q96LZ7 410 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 TIMM29Q9BSF4 260 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ZDHHC5Q9C0B5 715 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 CD274Q9NZQ7 290 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PILRBQ9UKJ0 227 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 ADAM21Q9UKJ8 722 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 PDE10AQ9Y233 779 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 DGKBQ9Y6T7 804 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 R4GN57 208 aa9.51□□□□□ -0.89
SNRNP40-201ENST00000263694 OR52A4PA6NMU1 304 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 A8MT66 165 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PDZK1P1A8MUH7 402 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ARHGEF33A8MVX0 844 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PATE3B3GLJ2 98 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 GFYI3L273 518 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 VILLO15195 856 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 KERAO60938 352 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 FGF3P11487 239 aaPredicted RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 NEFHP12036 1026 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ACADLP28330 430 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ACTR1BP42025 376 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 AGTR2P50052 363 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 AFF3P51826 1226 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 KPNA2P52292 529 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 C21orf59P57076 290 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 NXPH1P58417 271 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ACTR1AP61163 376 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 DMPKQ09013 629 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PRKG2Q13237 762 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 TGFBIQ15582 683 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CHI3L2Q15782 390 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 CCDC6Q16204 474 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 FAM219BQ5XKK7 198 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 ATG14Q6ZNE5 492 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 IQCHQ86VS3 1027 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 PARGQ86W56 976 aa9.5□□□□□ -0.89
SNRNP40-201ENST00000263694 OR5AR1Q8NGP9 310 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms