RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 CHPFQ8IZ52 775 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 OR6Y1Q8NGX8 325 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PRRG3Q9BZD7 231 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 DUS2Q9NX74 493 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 STMN3Q9NZ72 180 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 CCL16O15467 120 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 C1QAP02745 245 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 RHOP08100 348 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TLX1P31314 330 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 RAD23AP54725 363 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 AGKQ53H12 422 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 FBXO15Q8NCQ5 510 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TTLQ8NG68 377 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 UGT2B28Q9BY64 529 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ELL3Q9HB65 397 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 OR10H1Q9Y4A9 318 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3DA0A087WVF3 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3IA0A087WXS9 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3EA0A087X179 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3KA0A087X1G2 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3FA6NER0 549 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3LB9A6J9 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3HP0C7X1 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ITGAXP20702 1163 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PCYT1AP49585 367 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 MPP1Q00013 466 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 DYNC1I2Q13409 638 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ANXA8L1Q5VT79 327 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3GQ6DHY5 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3CQ6IPX1 549 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PAGE2Q7Z2X7 111 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 DEFB107AQ8IZN7 70 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 UXS1Q8NBZ7 420 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 TM6SF2Q9BZW4 377 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PALMDQ9NP74 551 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 RUVBL1Q9Y265 456 aaKnown RBP8.09□□□□□ -1.11
PTPN3-201ENST00000262539 C5orf67F2Z3F1 127 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 SCELO95171 688 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PEX11BO96011 259 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ADH5P11766 374 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 GNAZP19086 355 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 ERVK-21P61565 698 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 COPZ1P61923 177 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 PFKFB4Q16877 469 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 HM13Q8TCT9 377 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 SPATA7Q9P0W8 599 aa8.09□□□□□ -1.11
PTPN3-201ENST00000262539 GTPBP1O00178 669 aaKnown RBP8.09□□□□□ -1.12
PTPN3-201ENST00000262539 KLHL41O60662 606 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 CBX6O95503 412 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 EFEMP2O95967 443 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 GRIA2P42262 883 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 ST13P50502 369 aaKnown RBP8.09□□□□□ -1.12
PTPN3-201ENST00000262539 LRRC36Q1X8D7 754 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 RAB6CQ53S08 254 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF805Q5CZA5 627 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 CAMK1DQ8IU85 385 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 CRIPAKQ8N1N5 446 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 NAT16Q8N8M0 369 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 OR13J1Q8NGT2 312 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 WDR36Q8NI36 951 aaKnown RBP8.09□□□□□ -1.12
PTPN3-201ENST00000262539 MAELQ96JY0 434 aaKnown RBP8.09□□□□□ -1.12
PTPN3-201ENST00000262539 RAB6CQ9H0N0 254 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 CXCL16Q9H2A7 254 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 KCNN2Q9H2S1 579 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 PIF1Q9H611 641 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 GPRC5BQ9NZH0 403 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.12
PTPN3-201ENST00000262539 MYH10P35580 1976 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FAM234BA2RU67 622 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ANKDD1BA6NHY2 528 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TULP3O75386 442 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NTSP30990 170 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 EMX2Q04743 252 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 VAC14Q08AM6 782 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NCF4Q15080 339 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 DHFR2Q86XF0 187 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TNS4Q8IZW8 715 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 GFM2Q969S9 779 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 EME1Q96AY2 570 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 TPD52L3Q96J77 140 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 WDR83Q9BRX9 315 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 KLHL1Q9NR64 748 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 LOC100653049A0A140TA62 436 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 MAGEA13PA6NCF6 341 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 KRT34O76011 436 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 CHRNB3Q05901 458 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 VN1R2Q8NFZ6 395 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 C19orf60Q96EN9 201 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ASIC5Q9NY37 505 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 ABI3Q9P2A4 366 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
PTPN3-201ENST00000262539 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FAM25AB3EWG3 89 aa8.08□□□□□ -1.12
PTPN3-201ENST00000262539 FAM25CB3EWG5 89 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms