RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CD9P21926 228 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 UFM1P61960 85 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ILF2Q12905 390 aaKnown RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 LRP8Q14114 963 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 FLOT2Q14254 428 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 ACOX1Q15067 660 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 CRY1Q16526 586 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 PARS2Q7L3T8 475 aaKnown RBP13.32□□□□□ -0.28
VMP1-201ENST00000262291 SUN2Q9UH99 717 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
VMP1-201ENST00000262291 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 HEPACAM2A8MVW5 462 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 UPK3BL1B0FP48 263 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 UPK3BL2E5RIL1 263 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 NRP2O60462 931 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PCSK6P29122 969 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 VIPR1P32241 457 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 ABRAXAS2Q15018 415 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 MIER2Q8N344 545 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PBX4Q9BYU1 374 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 INIPQ9NRY2 104 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PKD2L2Q9NZM6 624 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 TCF20Q9UGU0 1960 aaKnown RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 SLC22A2O15244 555 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 LINC01565O15544 149 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 VCLP18206 1134 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 ADSLP30566 484 aaPredicted RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 WASP42768 502 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 LYPLAL1Q5VWZ2 237 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 CYP2R1Q6VVX0 501 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 MILR1Q7Z6M3 343 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 KIAA0907Q7Z7F0 614 aaPredicted RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 SFRP1Q8N474 314 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 FNDC5Q8NAU1 212 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 BPIFB1Q8TDL5 484 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 SLC35B4Q969S0 331 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 DCUN1D1Q96GG9 259 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PDLIM5Q96HC4 596 aaKnown RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 ARL15Q9NXU5 204 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PTBP2Q9UKA9 531 aaKnown RBP13.31□□□□□ -0.28
VMP1-201ENST00000262291 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 RNF11Q9Y3C5 154 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 OARD1Q9Y530 152 aa13.31□□□□□ -0.28
VMP1-201ENST00000262291 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 SLC9A3R1O14745 358 aaPredicted RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 CHEK2O96017 543 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ATP1B2P14415 290 aaPredicted RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 SLC7A2P52569 658 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ST8SIA6P61647 398 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 HMGCS1Q01581 520 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 STX5Q13190 355 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 DMC1Q14565 340 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ZXDCQ2QGD7 858 aaPredicted RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 BRAT1Q6PJG6 821 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 Q6ZSR9 355 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 LMNTD1Q8N9Z9 388 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 RHBDF1Q96CC6 855 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ASB16Q96NS5 453 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 C1QTNF3Q9BXJ4 246 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 GRIP2Q9C0E4 1043 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 NKX2-4Q9H2Z4 354 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 AK5Q9Y6K8 562 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PRORSD1PA6NEY8 169 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 AGAP14A8MT82 685 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ADH1CP00326 375 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 RB1P06400 928 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ME2P23368 584 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 FSHRP23945 695 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PEX2P28328 305 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PREPP48147 710 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 CTSCP53634 463 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ABRQ12979 859 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 TRAF3Q13114 568 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ZNF805Q5CZA5 627 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 UBE2R2Q712K3 238 aaPredicted RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 ELMO1Q92556 727 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ZNF382Q96SR6 550 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 SERPINI1Q99574 410 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ATG10Q9H0Y0 220 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PFDN4Q9NQP4 134 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 MAP10Q9P2G4 905 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 KLQ9UEF7 1012 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PRPF19Q9UMS4 504 aaKnown RBP13.3□□□□□ -0.28
VMP1-201ENST00000262291 PCDHGB4Q9UN71 923 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 SLC8A2Q9UPR5 921 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PDE10AQ9Y233 779 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 PCDHGB5Q9Y5G0 923 aa13.3□□□□□ -0.28
VMP1-201ENST00000262291 ZNF106Q9H2Y7 1883 aaKnown RBP13.29□□□□□ -0.28
VMP1-201ENST00000262291 LOC730098B7Z3J9 87 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 H3BNX3 289 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 K7ESM1 405 aa13.29□□□□□ -0.28
VMP1-201ENST00000262291 OR56A5P0C7T3 313 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms