RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ABCG2Q9UNQ0 655 aa12.77□□□□□ -0.36
SNX1-201ENST00000261889 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 PRMT5O14744 637 aaPredicted RBP12.77□□□□□ -0.37
SNX1-201ENST00000261889 RAMP2O60895 175 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 CHEK2O96017 543 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 MT-ND2P03891 347 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 ALPIP09923 528 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 ZNF12P17014 697 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 CRISP3P54108 245 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 TBX4P57082 545 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 TWF1Q12792 350 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 GPSM1Q86YR5 675 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 PDPRQ8NCN5 879 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 ZNF555Q8NEP9 628 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 NRBF2Q96F24 287 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 TSGA13Q96PP4 275 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 AARSD1Q9BTE6 412 aaKnown RBP12.77□□□□□ -0.37
SNX1-201ENST00000261889 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 SNX8Q9Y5X2 465 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 A0A096LPI6 279 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 LOC100130705A0A1B0GUX0 176 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 PGLSO95336 258 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 ANGPTL1O95841 491 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 VIPP01282 170 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 C21orf33P30042 268 aaPredicted RBP12.77□□□□□ -0.37
SNX1-201ENST00000261889 LHX1P48742 406 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 TRIM32Q13049 653 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.37
SNX1-201ENST00000261889 CES5AQ6NT32 575 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 NIPAL1Q6NVV3 410 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 DMRTB1Q96MA1 342 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
SNX1-201ENST00000261889 EBPLQ9BY08 206 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 SLC25A37Q9NYZ2 338 aa12.77□□□□□ -0.37
SNX1-201ENST00000261889 BBIP1A8MTZ0 92 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 CACNG3O60359 315 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 GLUD1P00367 558 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 MC4RP32245 332 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 CDKN2CP42773 168 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 STC1P52823 247 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
SNX1-201ENST00000261889 RAD51Q06609 339 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
SNX1-201ENST00000261889 PRSS36Q5K4E3 855 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 FAM180BQ6P0A1 224 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 NANOGNBQ7Z5D8 188 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 ZNF280BQ86YH2 543 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 HID1Q8IV36 788 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 ZNF540Q8NDQ6 660 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 RAB2BQ8WUD1 216 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 PROX1Q92786 737 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 DOK1Q99704 481 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 TAS2R13Q9NYV9 303 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 SLC7A4O43246 635 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 SEC22BO75396 215 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 POU2F1P14859 743 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 PSEN2P49810 448 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 NPTX1Q15818 432 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 MICU2Q8IYU8 434 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 SCML4Q8N228 414 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 LIX1Q8N485 282 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 LMNTD1Q8N9Z9 388 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 ZNF420Q8TAQ5 688 aaPredicted RBP12.76□□□□□ -0.37
SNX1-201ENST00000261889 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNX1-201ENST00000261889 TUBA8Q9NY65 449 aaPredicted RBP12.76□□□□□ -0.37
SNX1-201ENST00000261889 PTBP2Q9UKA9 531 aaKnown RBP12.76□□□□□ -0.37
SNX1-201ENST00000261889 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 PCDHB14Q9Y5E9 798 aa12.76□□□□□ -0.37
SNX1-201ENST00000261889 MROH6A6NGR9 719 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 BCKDKO14874 412 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 CNOT3O75175 753 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 SEC24AO95486 1093 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 PCSK1P29120 753 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 DDX39BQ13838 428 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 CRY1Q16526 586 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 FAM151BQ6UXP7 276 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 KIAA0408Q6ZU52 694 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 POC5Q8NA72 575 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 TRUB1Q8WWH5 349 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 DACH2Q96NX9 599 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 IPPKQ9H8X2 491 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 TRMT6Q9UJA5 497 aaKnown RBP12.75□□□□□ -0.37
SNX1-201ENST00000261889 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
SNX1-201ENST00000261889 CPNE6O95741 557 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms