RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 A0A0J9YYE9 177 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 MCIDASD6RGH6 385 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PGRMC2O15173 223 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PDPK1O15530 556 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TREHO43280 583 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 DLGAP3O95886 979 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 C8AP07357 584 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 LAMP2P13473 410 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 AOC1P19801 751 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TIE1P35590 1138 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 GRIA2P42262 883 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PTSQ03393 145 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TRIM25Q14258 630 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SMCO1Q147U7 214 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ARHGAP19Q14CB8 494 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 UMODL1-AS1Q8N2C9 162 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HERVK_113Q902F9 699 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SEC14L1Q92503 715 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SLC39A3Q9BRY0 314 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KLHL31Q9H511 634 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ZDHHC7Q9NXF8 308 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 EURLQ9NYK6 297 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 GPSM3Q9Y4H4 160 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF541Q9H0D2 1346 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SLC22A1O15245 554 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TRMUO75648 421 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RCBTB2O95199 551 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 EBLN1P0CF75 366 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SOX9P48436 509 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R40P59535 323 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SEZ6Q53EL9 994 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 EEF1DP3Q658K8 133 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FIP1L1Q6UN15 594 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 GDPD4Q6W3E5 623 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF671Q8TAW3 534 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ALG3Q92685 438 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TOX2Q96NM4 488 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HOXD1Q9GZZ0 328 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TTYH1Q9H313 450 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 P2RX2Q9UBL9 471 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PRDM4Q9UKN5 801 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHB11Q9Y5F2 797 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PRRC2BQ5JSZ5 2229 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 DGKIO75912 1065 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SERPINA1P01009 418 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 FSHRP23945 695 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 SHMT2P34897 504 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PTGIRP43119 386 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ATN1P54259 1190 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RPL38P63173 70 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC85BQ15834 202 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 HSDL1Q3SXM5 330 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA1324Q6UXG2 1013 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 OR4K2Q8NGD2 314 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 TWIST2Q8WVJ9 160 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RBM18Q96H35 190 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 KCNH6Q9H252 994 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 MAGIXQ9H6Y5 334 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 ING3Q9NXR8 418 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 GALNT8Q9NY28 637 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 DNAJB9Q9UBS3 223 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 POFUT2Q9Y2G5 429 aa4.25□□□□□ -1.73
VPS13C-202ENST00000261517 RPL36Q9Y3U8 105 aaKnown RBP4.25□□□□□ -1.73
VPS13C-202ENST00000261517 PRAMEF11O60813 436 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NBNO60934 754 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TCN1P20061 433 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CD247P20963 164 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RPL10P27635 214 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CSNK1DP48730 415 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CEP68Q76N32 757 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 KIF2BQ8N4N8 673 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OR2AP1Q8NGE2 309 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TMCO6Q96DC7 493 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NPY6RQ99463 290 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 COMMD4Q9H0A8 199 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MOV10Q9HCE1 1003 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 XPNPEP1Q9NQW7 623 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF490Q9ULM2 529 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 COL24A1Q17RW2 1714 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 IGKV6D-21A0A0A0MT36 114 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MAGEB17A8MXT2 336 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GPR25O00155 361 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RGS10O43665 173 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MFSD11O43934 449 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CDK14O94921 469 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HAPLN1P10915 354 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CLCNKBP51801 687 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 BMPR2Q13873 1038 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PLEKHG6Q3KR16 790 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GPAT3Q53EU6 434 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 IFI44LQ53G44 452 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C6orf52Q5T4I8 152 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OLFML1Q6UWY5 402 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SERINC5Q86VE9 423 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HID1Q8IV36 788 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TRAM1L1Q8N609 369 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OR10H5Q8NGA6 315 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OR8J3Q8NGG0 315 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 OR5K1Q8NHB7 308 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZSCAN18Q8TBC5 510 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms