RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PNO1Q9NRX1 252 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ELOVL2Q9NXB9 296 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ETAA1Q9NY74 926 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 A8MUA0 341 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 B3GALT2O43825 422 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 NME6O75414 186 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ANGPTL1O95841 491 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 L1CAMP32004 1257 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PTGIRP43119 386 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 RPS9P46781 194 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 RFTN2Q52LD8 501 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PIWIL1Q96J94 861 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 MTERF1Q99551 399 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 OR51V1Q9H2C8 321 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 MED31Q9Y3C7 131 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 A0A1W2PRU2 124 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 FAM172BPA6NC97 362 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 VNN1O95497 513 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 FAUP35544 74 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 IL10RBQ08334 325 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 TNFAIP8L2Q6P589 184 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PEX5LQ8IYB4 626 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 FSTL5Q8N475 847 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 CYB5D2Q8WUJ1 264 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 RIPOR3Q96MK2 946 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 FEM1AQ9BSK4 669 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 DHX33Q9H6R0 707 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 SMPD3Q9NY59 655 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PMF1-BGLAPU3KQ54 211 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 IGLV3-22A0A075B6J6 115 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 A0A1W2PRG6 482 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF432O94892 652 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 CPN2P22792 545 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 AVPR1BP47901 424 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 NCBP2P52298 156 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 GAD2Q05329 585 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 CBFBQ13951 182 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SLC9B1Q4ZJI4 515 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ULK3Q6PHR2 472 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 RASSF6Q6ZTQ3 369 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SATL1Q86VE3 508 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 RBM18Q96H35 190 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 MALT1Q9UDY8 824 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PDPK1O15530 556 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 YBEYP58557 167 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PPIGQ13427 754 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 CERS6Q6ZMG9 384 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 RANBP3LQ86VV4 465 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 NUS1Q96E22 293 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PLIN3O60664 434 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PEX2P28328 305 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 OGFOD2Q6N063 350 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 TMEM139Q8IV31 216 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 COX18Q8N8Q8 333 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 KREMEN2Q8NCW0 462 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SLC38A4Q969I6 547 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 TRMT61BQ9BVS5 477 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 COPS7AQ9UBW8 275 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 COL14A1Q05707 1796 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SHOX2O60902 331 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ALOX5P09917 674 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ACADLP28330 430 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 CBX5P45973 191 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 TLR1Q15399 786 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SLC10A6Q3KNW5 377 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 FAM174BQ3ZCQ3 159 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 LNX2Q8N448 690 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 LRRC57Q8N9N7 239 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 SLAIN1Q8ND83 568 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 GRHL3Q8TE85 626 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 CAPNS2Q96L46 248 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 ELAC1Q9H777 363 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 IFT80Q9P2H3 777 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 IL36AQ9UHA7 158 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 PRMT3O60678 531 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 MTX2O75431 263 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 XIAPP98170 497 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 TRMT10BQ6PF06 316 aaKnown RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 GALNT7Q86SF2 657 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 IFT27Q9BW83 186 aa11.91□□□□□ -0.5
COL8A1-201ENST00000261037 GPN1Q9HCN4 374 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-201ENST00000261037 MTHFD1P11586 935 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 OLR1P78380 273 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 GRSF1Q12849 480 aaKnown RBP eCLIP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 CCSAPQ6IQ19 270 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 PDE12Q6L8Q7 609 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 TMEM214Q6NUQ4 689 aaKnown RBP11.9□□□□□ -0.5
COL8A1-201ENST00000261037 ZCCHC12Q6PEW1 402 aa11.9□□□□□ -0.5
COL8A1-201ENST00000261037 LRP10Q7Z4F1 713 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms