RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SETDB1Q15047 1291 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PON2Q15165 354 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TMEM52BQ4KMG9 183 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PRAMEF14Q5SWL7 426 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CEP85LQ5SZL2 805 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 HECTD2Q5U5R9 776 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 DCUN1D2Q6PH85 259 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CALHM3Q86XJ0 350 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 RFX6Q8HWS3 928 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM156AQ8NDB6 213 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 GSDMBQ8TAX9 411 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 RNF138Q8WVD3 245 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 GCNAQ96QF7 691 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SARGQ9BW04 601 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF148Q9UQR1 794 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ERICH4A6NGS2 130 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 BTN3A3O00478 584 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC16A8O95907 504 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 RBMXP38159 391 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PRKAA2P54646 552 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TPI1P60174 286 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 MTA1Q13330 715 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ZNF750Q32MQ0 723 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TMTC4Q5T4D3 741 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 FHL5Q5TD97 284 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CPZQ66K79 652 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 FRMPD2BQ6IN97 320 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TANKQ92844 425 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PROK2Q9HC23 129 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 XPR1Q9UBH6 696 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ABCD2Q9UBJ2 740 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PCOLCE2Q9UKZ9 415 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 KCNE3Q9Y6H6 103 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 IGLON5A6NGN9 336 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 TSPAN6O43657 245 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 MAN1A2O60476 641 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 NR1D1P20393 614 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SERPINB4P48594 390 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CALCOCO2Q13137 446 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ACCSLQ4AC99 568 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CATSPEREQ5SY80 951 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PPP2R2DQ66LE6 453 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 NUDT18Q6ZVK8 323 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SRLQ86TD4 932 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SIX5Q8N196 739 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC2A11Q9BYW1 496 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 SPATA6Q9NWH7 488 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 CUEDC1Q9NWM3 386 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 MID2Q9UJV3 735 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 ICKQ9UPZ9 632 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 PCDHA9Q9Y5H5 950 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 STON1Q9Y6Q2 735 aa5.48□□□□□ -1.53
TOPBP1-201ENST00000260810 C7orf72A4D263 438 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PRKNO60260 465 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 KAT7O95251 611 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 FAM107AO95990 144 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 C6P13671 934 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 WASP42768 502 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 LIMS1P48059 325 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MAMSTRQ6ZN01 415 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TMEM102Q8N9M5 508 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PYCR2Q96C36 320 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TOE1Q96GM8 510 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 IL17FQ96PD4 163 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 IARS2Q9NSE4 1012 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 GDE1Q9NZC3 331 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 A0A1W2PQM1 296 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 OR52A4PA6NMU1 304 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ISM1B1AKI9 464 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TMPRSS11DO60235 418 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 NTF4P34130 210 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MSH2P43246 934 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 GLRBP48167 497 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 CCDC85BQ15834 202 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ALG11Q2TAA5 492 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 METRNLQ641Q3 311 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 NXPE1Q8N323 547 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 SLC25A41Q8N5S1 370 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 CPSF7Q8N684 471 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 PRSS33Q8NF86 280 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 OSBPL6Q9BZF3 934 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ANAPC5Q9UJX4 755 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 INTS1Q8N201 2190 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 RAMP2O60895 175 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 UGT2B4P06133 528 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 FGF4P08620 206 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 MYL4P12829 197 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 AK4P27144 223 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 TMCO4Q5TGY1 634 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 C4orf50Q6ZRC1 276 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 KCNMB4Q86W47 210 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 IPMKQ8NFU5 416 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 JPH3Q8WXH2 748 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 LMF1Q96S06 567 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 GPR21Q99679 349 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 ALOXE3Q9BYJ1 711 aa5.47□□□□□ -1.53
TOPBP1-201ENST00000260810 EPN3Q9H201 632 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms