RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 RD3Q7Z3Z2 195 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CXorf40AQ8TE69 158 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 SNX27Q96L92 541 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 DUSP16Q9BY84 665 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TNKS2Q9H2K2 1166 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 IKZF4Q9H2S9 585 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 ZNF541Q9H0D2 1346 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CXCR6O00574 342 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CD40LGP29965 261 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 LCN1P31025 176 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TSPAN5P62079 268 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FUT2Q10981 343 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CBLBQ13191 982 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 DCAF12L1Q5VU92 463 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 MON1AQ86VX9 555 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TMEM126BQ8IUX1 230 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 SPERTQ8NA61 448 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TRPV3Q8NET8 790 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CEP76Q8TAP6 659 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 DCAKDQ8WVC6 231 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CD101Q93033 1021 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 LPPQ93052 612 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 UBE2E3Q969T4 207 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TSSK3Q96PN8 268 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FAM124BQ9H5Z6 455 aaPredicted RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FARSBQ9NSD9 589 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TESMINQ9Y4I5 508 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 LOC100130705A0A1B0GUX0 176 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 B4GALT5O43286 388 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CDKN2BP42772 138 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 LIMK2P53671 638 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 S100A12P80511 92 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FSTL4Q6MZW2 842 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FBXO42Q6P3S6 717 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 JOSD2Q8TAC2 188 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 DEDD2Q8WXF8 326 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 TMEM203Q969S6 136 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 MAN2B2Q9Y2E5 1009 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 E9PAM4 449 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 PRMT5O14744 637 aaPredicted RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 USP2O75604 605 aaPredicted RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CHRNB1P11230 501 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 BMP7P18075 431 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 HNMTP50135 292 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 PIGFQ07326 219 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 FAM220AQ7Z4H9 259 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 OR7G1Q8NGA0 311 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
DCLK1-201ENST00000255448 GAB3Q8WWW8 586 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 CAPNS2Q96L46 248 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 BBS4Q96RK4 519 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 C11orf16Q9NQ32 467 aa10.79□□□□□ -0.68
DCLK1-201ENST00000255448 A8MU76 341 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 DISC1C4P0D8 188 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 INMT-MINDY4F8WBC2 141 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 NUPL2O15504 423 aaKnown RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 PEPDP12955 493 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 SELPP16109 830 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 LYPLAL1Q5VWZ2 237 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TRAPPC5Q8IUR0 188 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 NRG4Q8WWG1 115 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TSNAXQ99598 290 aaKnown RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TTPALQ9BTX7 342 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 SOX17Q9H6I2 414 aaPredicted RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 SH3D21A4FU49 640 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 MPZL2O60487 215 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 ZNF14P17017 642 aaPredicted RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 JAM2P57087 298 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TSTQ16762 297 aaKnown RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 CHSY3Q70JA7 882 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 COMMD7Q86VX2 200 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 MAFIPQ8WZ33 124 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 AZIN2Q96A70 460 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 MUS81Q96NY9 551 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 PFDN5Q99471 154 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TUBA1CQ9BQE3 449 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 DPAGT1Q9H3H5 408 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 MFSD1Q9H3U5 465 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TAS2R3Q9NYW6 316 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 GPN3Q9UHW5 284 aaPredicted RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 NUAK1O60285 661 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 APOC1P02654 83 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TPSB2P20231 275 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TTPAP49638 278 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 HNRNPFP52597 415 aaKnown RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 CDH12P55289 794 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 ZNF280AP59817 542 aaPredicted RBP10.78□□□□□ -0.68
DCLK1-201ENST00000255448 RAB2AP61019 212 aa10.78□□□□□ -0.68
DCLK1-201ENST00000255448 TPSAB1Q15661 275 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms