RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 RMI1Q9H9A7 625 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 VTI1BQ9UEU0 232 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 PCTPQ9UKL6 214 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SLC17A4Q9Y2C5 497 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 FANCMQ8IYD8 2048 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 LAMA1P25391 3075 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ABCA7Q8IZY2 2146 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 POM121BA6NF01 834 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CCT8L1PA6NM43 557 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 KMOO15229 486 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 HDAC3O15379 428 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 TAPBPO15533 448 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 GRID2O43424 1007 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ZNF217O75362 1048 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 DCTN3O75935 186 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 FUCA1P04066 466 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 CEACAM5P06731 702 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ANXA5P08758 320 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CYP2A7P20853 494 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 RPS9P46781 194 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 CCR5P51681 352 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 AP1S2P56377 157 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SH3BP2P78314 561 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 LCP2Q13094 533 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 RPA4Q13156 261 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 FBXO48Q5FWF7 155 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SH2D4BQ5SQS7 431 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CUZD1Q86UP6 607 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SPEM1Q8N4L4 309 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 OXR1Q8N573 874 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 MCOLN3Q8TDD5 553 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ZNF483Q8TF39 744 aaPredicted RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 TOE1Q96GM8 510 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 LRRC37BQ96QE4 947 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 EGFL8Q99944 293 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ZBTB26Q9HCK0 441 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 TNFRSF12AQ9NP84 129 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 DNAJC28Q9NX36 388 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 WSB2Q9NYS7 404 aaPredicted RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 CYP8B1Q9UNU6 501 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 PRKAB1Q9Y478 270 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 ASB1Q9Y576 335 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 TDRD6O60522 2096 aaKnown RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 CACNB4O00305 520 aaPredicted RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 PPP6CO00743 305 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 FPGTO14772 594 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 MLYCDO95822 493 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 IGHV4-34P06331 123 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 FGF4P08620 206 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HIST1H2AGP0C0S8 130 aaPredicted RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 TSPAN8P19075 237 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HIST1H2ADP20671 130 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 CD6P30203 668 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 GGT5P36269 586 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HNMTP50135 292 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 IDH3AP50213 366 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 ABRQ12979 859 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 NFE2L1Q14494 772 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 EPGNQ6UW88 154 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 YTHDF3Q7Z739 585 aaKnown RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 FITM2Q8N6M3 262 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 TMEM145Q8NBT3 493 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 UBTD2Q8WUN7 234 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 STON2Q8WXE9 905 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 CCT6BQ92526 530 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 ESAMQ96AP7 390 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 SCARF2Q96GP6 870 aaPredicted RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 FAR2Q96K12 515 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 BMFQ96LC9 184 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 FOPNLQ96NB1 174 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 MYOCQ99972 504 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 EBF4Q9BQW3 602 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 H2AFJQ9BTM1 129 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 CD244Q9BZW8 370 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 C6orf106Q9H6K1 298 aaPredicted RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 ABCF3Q9NUQ8 709 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 HEY2Q9UBP5 337 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 SLC23A2Q9UGH3 650 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 ZNHIT2Q9UHR6 403 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 EIF2B4Q9UI10 523 aaKnown RBP9.24□□□□□ -0.93
NIP7-202ENST00000254941 MUTYHQ9UIF7 546 aa9.24□□□□□ -0.93
NIP7-202ENST00000254941 PABPN1LA6NDY0 278 aaKnown RBP9.23□□□□□ -0.93
NIP7-202ENST00000254941 ARHGEF33A8MVX0 844 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 TMEM233B4DJY2 109 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 STK25O00506 426 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 APBB3O95704 486 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 CATP04040 527 aaKnown RBP9.23□□□□□ -0.93
NIP7-202ENST00000254941 MAP4P27816 1152 aaKnown RBP9.23□□□□□ -0.93
NIP7-202ENST00000254941 ACADLP28330 430 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 SERPINB3P29508 390 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 AKT2P31751 481 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 HSPA7P48741 367 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 CLDN2P57739 230 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 KIAA1024LP59773 190 aa9.23□□□□□ -0.93
NIP7-202ENST00000254941 PFN3P60673 137 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms