RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 VIPR1P32241 457 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 RPS9P46781 194 aaKnown RBP18.66■□□□□ 0.58
PTPRE-201ENST00000254667 SLC18A1P54219 525 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 FSTL1Q12841 308 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 FBXO48Q5FWF7 155 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 PRRG4Q9BZD6 226 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 FAM159BA6NKW6 160 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 RGS10O43665 173 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 SRPRAP08240 638 aaKnown RBP18.66■□□□□ 0.58
PTPRE-201ENST00000254667 SLC11A1P49279 550 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 EIF2B2P49770 351 aaKnown RBP18.66■□□□□ 0.58
PTPRE-201ENST00000254667 HERC3Q15034 1050 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 MINDY4Q4G0A6 757 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 ARSIQ5FYB1 569 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 MBOAT1Q6ZNC8 495 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 LRRC70Q7Z2Q7 622 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 ZNF461Q8TAF7 563 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 CDADC1Q9BWV3 514 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 EBPLQ9BY08 206 aa18.66■□□□□ 0.58
PTPRE-201ENST00000254667 PRORSD1PA6NEY8 169 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 LIN7AO14910 233 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 RB1P06400 928 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 MAT2AP31153 395 aaKnown RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 RPL26P61254 145 aaKnown RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 PYDC2Q56P42 97 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 LIN54Q6MZP7 749 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 AVL9Q8NBF6 648 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 SLC35G5Q96KT7 338 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 A0A1W2PQ45 241 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 A0A1W2PQY0 241 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 PITPNM1O00562 1244 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 DENND5AQ6IQ26 1287 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 RIIAD1A6NNX1 92 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 AGPSO00116 658 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CPN2P22792 545 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 ZNF846Q147U1 533 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 IFI44LQ53G44 452 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 DLK2Q6UY11 383 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 ZC3H3Q8IXZ2 948 aaKnown RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 NPY6RQ99463 290 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 DUSP26Q9BV47 211 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CACNG4Q9UBN1 327 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CIDEBQ9UHD4 219 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 XRN1Q8IZH2 1706 aaKnown RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CCDC182A6NF36 153 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 OR5F1O95221 314 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 SNAI1O95863 264 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 GIMD1P0DJR0 217 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 CCR8P51685 355 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 HSPB3Q12988 150 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 FAM81AQ8TBF8 368 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 ELL3Q9HB65 397 aaPredicted RBP18.65■□□□□ 0.58
PTPRE-201ENST00000254667 COPS7AQ9UBW8 275 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
PTPRE-201ENST00000254667 MAGEB3O15480 346 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 TEX28O15482 410 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 C1QTNF8P60827 252 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 TXNDC8Q6A555 127 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 PAQR3Q6TCH7 311 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 SMOQ99835 787 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 TDP1Q9NUW8 608 aa18.64■□□□□ 0.58
PTPRE-201ENST00000254667 CXCR6O00574 342 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 PIRO00625 290 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 KDELR3O43731 214 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 CCNB2O95067 398 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 SERINC3Q13530 473 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 QPRTQ15274 297 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 EIPR1Q53HC9 387 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 HFE2Q6ZVN8 426 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 CCM2Q9BSQ5 444 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 TRMT61BQ9BVS5 477 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 CAPN8A6NHC0 703 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 SOD2P04179 222 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 SRP54P61011 504 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 FAM174BQ3ZCQ3 159 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 ZZZ3Q8IYH5 903 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 GIPC3Q8TF64 312 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 DGCR14Q96DF8 476 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 RIOK2Q9BVS4 552 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 GNEQ9Y223 722 aaKnown RBP18.64■□□□□ 0.57
PTPRE-201ENST00000254667 H3BNX3 289 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 GNSP15586 552 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 CCR10P46092 362 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 GHRHRQ02643 423 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 MYLK3Q32MK0 819 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 DCAF12L1Q5VU92 463 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 CADM2Q8N3J6 435 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 OR10A6Q8NH74 314 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 ZCCHC10Q8TBK6 192 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 ZNF347Q96SE7 839 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM248Q9NWD8 314 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 FOXO6A8MYZ6 492 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 PRPS1L1P21108 318 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 NDUFA5Q16718 116 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 PIK3R6Q5UE93 754 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 NUDT13Q86X67 352 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 DCAF4L2Q8NA75 395 aa18.64■□□□□ 0.57
PTPRE-201ENST00000254667 TSTD1Q8NFU3 115 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms