RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ZNF398Q8TD17 642 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 THAP4Q8WY91 577 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 KRT35Q92764 455 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 HAUS1Q96CS2 278 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 RBM41Q96IZ5 413 aaKnown RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 C12orf66Q96MD2 445 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 PPM1MQ96MI6 270 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 FICDQ9BVA6 458 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 FSD1LQ9BXM9 530 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 PITPNM3Q9BZ71 974 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 HRASLS2Q9NWW9 162 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 RSPH14Q9UHP6 348 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 PCDHGA9Q9Y5G4 932 aaKnown RBP10.04□□□□□ -0.8
VPS50-201ENST00000251739 DOCK10Q96BY6 2186 aa10.04□□□□□ -0.8
VPS50-201ENST00000251739 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 ABCA12Q86UK0 2595 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 LRBAP50851 2863 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 TRBV5-4A0A0C4DH59 114 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 OR6C74A6NCV1 312 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 PJA2O43164 708 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 SCRG1O75711 98 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 ANXA9O76027 345 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 SRP72O76094 671 aaKnown RBP10.03□□□□□ -0.8
VPS50-201ENST00000251739 SORBS2O94875 1100 aaKnown RBP10.03□□□□□ -0.8
VPS50-201ENST00000251739 ZRANB2O95218 330 aaKnown RBP eCLIP10.03□□□□□ -0.8
VPS50-201ENST00000251739 CAPN1P07384 714 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 TPM1P09493 284 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 SLC35G4P0C7Q5 338 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 MSH3P20585 1137 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 RBL1P28749 1068 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 PBLDP30039 288 aaPredicted RBP10.03□□□□□ -0.8
VPS50-201ENST00000251739 PTPN7P35236 360 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 TNNT3P45378 269 aaPredicted RBP10.03□□□□□ -0.8
VPS50-201ENST00000251739 GEMP55040 296 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 MLLT10P55197 1068 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 ABRQ12979 859 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 OLIG2Q13516 323 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 DENND5AQ6IQ26 1287 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 FAM198BQ6UWH4 519 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 DET1Q7L5Y6 550 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 DAAM2Q86T65 1068 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 NXPE1Q8N323 547 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 MEIOBQ8N635 442 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 TC2NQ8N9U0 490 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 TEX19Q8NA77 164 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 ACTL9Q8TC94 416 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 HM13Q8TCT9 377 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 C10orf88Q9H8K7 445 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 ARNT2Q9HBZ2 717 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 KCND1Q9NSA2 647 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 EFR3BQ9Y2G0 817 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 CELSR2Q9HCU4 2923 aa10.03□□□□□ -0.8
VPS50-201ENST00000251739 UBA6A0AVT1 1052 aaPredicted RBP10.02□□□□□ -0.81
VPS50-201ENST00000251739 C2orf81A6NN90 581 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 RAB40ALP0C0E4 278 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 PSMB4P28070 264 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 NDUFS1P28331 727 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 CTNNA1P35221 906 aaKnown RBP10.02□□□□□ -0.81
VPS50-201ENST00000251739 PTGIRP43119 386 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 CHAF1BQ13112 559 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 PLEKHS1Q5SXH7 462 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 ITPRIPL1Q6GPH6 555 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 LCN10Q6JVE6 187 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 FBXO38Q6PIJ6 1188 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 TMEM126BQ8IUX1 230 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 DSELQ8IZU8 1212 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 ACVR1CQ8NER5 493 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 OR13C4Q8NGS5 318 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
VPS50-201ENST00000251739 HEMGNQ9BXL5 484 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 TLR10Q9BXR5 811 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 CHST8Q9H2A9 424 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 OR52A5Q9H2C5 316 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 ASB8Q9H765 288 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 C1GALT1Q9NS00 363 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 TFR2Q9UP52 801 aa10.02□□□□□ -0.81
VPS50-201ENST00000251739 FARSAQ9Y285 508 aaKnown RBP10.02□□□□□ -0.81
VPS50-201ENST00000251739 C17orf113A0A1B0GUU1 675 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 SLC9B1P1A6NJY1 282 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 AKR1B15C9JRZ8 316 aaPredicted RBP10.01□□□□□ -0.81
VPS50-201ENST00000251739 MEN1O00255 615 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 MATN2O00339 956 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 BTN3A3O00478 584 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 LDB2O43679 373 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 MAGEA1P43355 309 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 UQCRFS1P47985 274 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ARCN1P48444 511 aaKnown RBP10.01□□□□□ -0.81
VPS50-201ENST00000251739 ARL4DP49703 201 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 GSDMDP57764 484 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 RPS15P62841 145 aaKnown RBP10.01□□□□□ -0.81
VPS50-201ENST00000251739 OTUD4Q01804 1114 aaKnown RBP10.01□□□□□ -0.81
VPS50-201ENST00000251739 CBLBQ13191 982 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ANKRD20A2Q5SQ80 823 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 TMTC4Q5T4D3 741 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ANKRD20A1Q5TYW2 823 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 PRAMEF17Q5VTA0 474 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ANKRD20A3Q5VUR7 823 aa10.01□□□□□ -0.81
VPS50-201ENST00000251739 ZNF385CQ66K41 422 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms