RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 PLGRKTQ9HBL7 147 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 CD84Q9UIB8 345 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 VPS51Q9UID3 782 aa12.39□□□□□ -0.43
RAB3IP-201ENST00000247833 KRT87PA6NCN2 255 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 C16orf96A6NNT2 1141 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 MTX2O75431 263 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 KRT6AP02538 564 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 KRT6BP04259 564 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ALDH4A1P30038 563 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 KRT6CP48668 564 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CLCN2P51788 898 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 EMX2Q04743 252 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CHRNA6Q15825 494 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CYBRD1Q53TN4 286 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 RETSATQ6NUM9 610 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 GALNT10Q86SR1 603 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 DRAXINQ8NBI3 349 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 LKAAEAR1Q8TD35 194 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 APOLD1Q96LR9 279 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CD320Q9NPF0 282 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 KIF17Q9P2E2 1029 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 DHRS7Q9Y394 339 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 MYLKQ15746 1914 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CXCR6O00574 342 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CA12O43570 354 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 FTH1P02794 183 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 CCNA2P20248 432 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 PWP1Q13610 501 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 THAP5Q7Z6K1 395 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ADGRG2Q8IZP9 1017 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 EID3Q8N140 333 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 DDHD1Q8NEL9 900 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ITCHQ96J02 903 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 EBPLQ9BY08 206 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 STK16O75716 305 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 WISP3O95389 354 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 MSH3P20585 1137 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 HTR1EP28566 365 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 USP41Q3LFD5 358 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ANKDD1AQ495B1 522 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ZNF621Q6ZSS3 439 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 GPR180Q86V85 440 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 ZBTB2Q8N680 514 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 SGCDQ92629 289 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 NPLQ9BXD5 320 aaPredicted RBP12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 MUC13Q9H3R2 512 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 RUBCNLQ9H714 662 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 PRSS21Q9Y6M0 314 aa12.38□□□□□ -0.43
RAB3IP-201ENST00000247833 TDRD15B5MCY1 1934 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 TOR1BO14657 336 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 TSPAN12O95859 305 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 SERPINA1P01009 418 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 PGRP06401 933 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 SULT1C3Q6IMI6 304 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 R3HCC1LQ7Z5L2 792 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 RGL4Q8IZJ4 473 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 TMEM169Q96HH4 297 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 HIPK3Q9H422 1215 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 TLR9Q9NR96 1032 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 MARCH5Q9NX47 278 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 IL17CQ9P0M4 197 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 AASSQ9UDR5 926 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 BLOC1S6Q9UL45 172 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 VPS4AQ9UN37 437 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 EVPLLA8MZ36 301 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 NTRK1P04629 796 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ANXA5P08758 320 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 SELPP16109 830 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 GJA1P17302 382 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 RPIAP49247 311 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ILF2Q12905 390 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ITGADQ13349 1161 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 TTC23Q5W5X9 447 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 C8orf82Q6P1X6 216 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ZC3H7AQ8IWR0 971 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 C2orf49Q9BVC5 232 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 BBS2Q9BXC9 721 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDHB1Q9Y5F3 818 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 CPQQ9Y646 472 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 DICER1Q9UPY3 1922 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-201ENST00000247833 H3BMQ9 156 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 WDR47O94967 919 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 TCF3P15923 654 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 AQP1P29972 269 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 CCR3P51677 355 aa12.36□□□□□ -0.43
RAB3IP-201ENST00000247833 GALNT18Q6P9A2 607 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms