RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 COMMD3Q9UBI1 195 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 MALT1Q9UDY8 824 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 IRGMA1A4Y4 181 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 PLOD2O00469 737 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 CTSHP09668 335 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 MAGEA6P43360 314 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 LEPRP48357 1165 aaKnown RBP9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 NOVP48745 357 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 ATP12AP54707 1039 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 CDH12P55289 794 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 PAFAH1B3Q15102 231 aaKnown RBP9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 RUNDC3AQ59EK9 446 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 COQ5Q5HYK3 327 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 ZNF678Q5SXM1 525 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 DPY19L3Q6ZPD9 716 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 C11orf65Q8NCR3 313 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 OR13F1Q8NGS4 319 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 ARHGEF33A8MVX0 844 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 GABRDO14764 452 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 FPGTO14772 594 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 MYCLP1P12525 358 aaPredicted RBP9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 RPS3P23396 243 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 GMFBP60983 142 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 LRP8Q14114 963 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 GRIK4Q16099 956 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 TECRLQ5HYJ1 363 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 NHSL2Q5HYW2 709 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 AGAP6Q5VW22 663 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 DOK6Q6PKX4 331 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 SH3BP5LQ7L8J4 393 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 PYURFQ96I23 114 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 C8orf48Q96LL4 319 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 ZNF778Q96MU6 729 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 RDH8Q9NYR8 311 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 DERAQ9Y315 318 aa9.39□□□□□ -0.91
NUDCD1-201ENST00000239690 PER2O15055 1255 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 TEX28O15482 410 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PAGE1O75459 146 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 C1RP00736 705 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ZNF286BP0CG31 522 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 DCDC1P59894 354 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SMARCB1Q12824 385 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SPCS2Q15005 226 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SUZ12Q15022 739 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CCDC157Q569K6 752 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CELF3Q5SZQ8 465 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 BLOC1S3Q6QNY0 202 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ADCK2Q7Z695 626 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 OR6Q1Q8NGQ2 317 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 NTAN1Q96AB6 310 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ERMAPQ96PL5 475 aaPredicted RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SPATC1LQ9H0A9 340 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 FBXO44Q9H4M3 255 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 KLHL28Q9NXS3 571 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 TMEM98Q9Y2Y6 226 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PRG3Q9Y2Y8 225 aaPredicted RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PTCH2Q9Y6C5 1203 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 DLGAP1O14490 977 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ACOT8O14734 319 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 EDIL3O43854 480 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 GOT2P00505 430 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PRPS2P11908 318 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PCSK2P16519 638 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 TYMPP19971 482 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 AXLP30530 894 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 NNMTP40261 264 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 RPS14P62263 151 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PFKPQ01813 784 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 BOP1Q14137 746 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 NFE2Q16621 373 aaPredicted RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 ANXA8L1Q5VT79 327 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 C9orf57Q5W0N0 161 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 SLC37A3Q8NCC5 494 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 NDNFQ8TB73 568 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 POLE3Q9NRF9 147 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 HSFX1Q9UBD0 423 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CDH7Q9ULB5 785 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 DYRK1BQ9Y463 629 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 PCDHGB6Q9Y5F9 930 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 CASTOR2A6NHX0 329 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 KERAO60938 352 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 OGNP20774 298 aaKnown RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 MC4RP32245 332 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 STARP49675 285 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 GMPSP49915 693 aaPredicted RBP9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 OR4D2P58180 307 aa9.38□□□□□ -0.91
NUDCD1-201ENST00000239690 RPS3AP61247 264 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms